Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC011406.1-201ENST00000512440 370 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 SNORA70.24-201ENST00000517233 118 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AL391987.6-201ENST00000305671 199 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MIR422A-201ENST00000362286 90 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 SNORA53-201ENST00000391141 249 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MRPS10P1-201ENST00000448483 130 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AL109933.2-201ENST00000452651 260 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 RNU2-31P-201ENST00000516954 155 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 SUMO2P18-201ENST00000518873 252 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AC023157.2-201ENST00000540596 141 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MIR3169-201ENST00000578032 83 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 DEFB117-201ENST00000602356 141 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MIR6840-201ENST00000611937 71 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 AC006435.5-201ENST00000624486 112 ntBASIC2.61□□□□□ -1.99
MKS1Q9NXB0 MIR335-201ENST00000362173 94 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 RNU1-58P-201ENST00000362413 163 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 SNORD114-7-201ENST00000362520 77 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 RNU6-23P-201ENST00000363283 107 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 RNU6-326P-201ENST00000365480 107 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 RNU6-505P-201ENST00000384427 107 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 SNORA40.19-201ENST00000390846 128 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 AC022018.1-201ENST00000430685 241 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 AL121890.1-201ENST00000435457 205 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.6□□□□□ -1.99
MKS1Q9NXB0 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
MKS1Q9NXB0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MKS1Q9NXB0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 SNORA27.1-201ENST00000362604 124 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 MIR491-201ENST00000384877 84 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 HMGN2P39-201ENST00000398005 273 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 MIR1253-201ENST00000408273 105 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RNU2-38P-201ENST00000410856 79 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 SERF1AP1-201ENST00000514575 187 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.59□□□□□ -1.99
MKS1Q9NXB0 MIR3145-201ENST00000580727 82 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 MIR4325-201ENST00000583049 90 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 AC037487.3-201ENST00000606668 112 ntBASIC2.59□□□□□ -1.99
MKS1Q9NXB0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 RNU6-271P-201ENST00000363858 105 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 MIR144-201ENST00000384886 86 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 SNORA11.1-201ENST00000408133 129 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 RNU2-61P-201ENST00000411069 191 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 HMGN2P34-201ENST00000437647 269 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 MTND4LP30-201ENST00000454092 297 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
MKS1Q9NXB0 SNORA70.12-201ENST00000516084 153 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 AC027419.1-201ENST00000522976 328 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
MKS1Q9NXB0 AL353149.1-201ENST00000610667 244 ntBASIC2.58□□□□□ -2
MKS1Q9NXB0 MTND5P6-201ENST00000422338 1798 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MKS1Q9NXB0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 MTCO1P5-201ENST00000433573 344 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 RPL23AP7-203ENST00000449021 469 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.57□□□□□ -2
MKS1Q9NXB0 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.57□□□□□ -2
MKS1Q9NXB0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.57□□□□□ -2
MKS1Q9NXB0 AC012433.1-201ENST00000588916 398 ntBASIC2.57□□□□□ -2
MKS1Q9NXB0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms