Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORD87-201ENST00000364849 89 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 RNU6-1264P-201ENST00000383891 107 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 SNORA40.5-201ENST00000391061 128 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 AC004866.1-201ENST00000411748 78 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG3Q9NT62 RPL31P41-201ENST00000477967 372 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 RPL23AP70-201ENST00000483361 460 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 RPS29P20-201ENST00000489592 171 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 RN7SKP179-201ENST00000516126 217 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 RNU6-107P-201ENST00000516643 102 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 AC090049.2-201ENST00000550377 109 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 NACAP3-201ENST00000552100 481 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 AC009163.5-201ENST00000575421 637 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG3Q9NT62 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ATG3Q9NT62 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 Y_RNA.229-201ENST00000364347 113 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 RNU6-915P-201ENST00000364943 103 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 CD24P4-201ENST00000382840 243 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 RNU6-622P-201ENST00000384272 103 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 HMGN2P30-201ENST00000423237 256 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 RPL26P9-201ENST00000457466 433 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 RNU7-23P-201ENST00000459465 62 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 RPS27AP10-201ENST00000496103 208 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 MIR3646-201ENST00000578301 84 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 AL391903.3-201ENST00000612158 163 ntBASIC3.73□□□□□ -1.81
ATG3Q9NT62 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG3Q9NT62 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATG3Q9NT62 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATG3Q9NT62 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG3Q9NT62 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG3Q9NT62 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG3Q9NT62 RNU6-1082P-201ENST00000364574 107 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 Y_RNA.310-201ENST00000365063 113 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 RNU6-1280P-201ENST00000365211 107 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 SNORA9.2-201ENST00000365361 133 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 MIR526A2-201ENST00000390198 65 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AL606845.1-201ENST00000404881 255 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG3Q9NT62 AL357134.1-201ENST00000445848 426 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AC107016.2-201ENST00000547968 190 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AC090897.2-201ENST00000581715 130 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 HMGN2P15-201ENST00000585707 270 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AC006254.2-201ENST00000603259 279 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 AC108081.1-201ENST00000604358 221 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 MIR3914-2-201ENST00000637339 95 ntBASIC3.72□□□□□ -1.81
ATG3Q9NT62 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG3Q9NT62 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG3Q9NT62 SNORA25.7-201ENST00000364375 127 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 RNU1-112P-201ENST00000364401 164 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 Y_RNA.368-201ENST00000365547 113 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 MIR208B-201ENST00000401172 77 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 RNA5SP504-201ENST00000410676 117 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG3Q9NT62 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATG3Q9NT62 BPY2DP-201ENST00000422208 265 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG3Q9NT62 RNU7-141P-201ENST00000459304 62 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 RNU5E-3P-201ENST00000515913 68 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 RNU6-168P-201ENST00000516189 101 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 AL356575.1-201ENST00000603008 283 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG3Q9NT62 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG3Q9NT62 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
ATG3Q9NT62 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.71□□□□□ -1.82
ATG3Q9NT62 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG3Q9NT62 AC091564.4-201ENST00000533934 2194 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 AC008264.2-201ENST00000610193 3731 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 Y_RNA.243-201ENST00000364481 109 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 Y_RNA.393-201ENST00000383936 102 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AL512604.1-201ENST00000404812 257 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.7□□□□□ -1.82
ATG3Q9NT62 AC063976.4-201ENST00000421971 163 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AL365496.1-201ENST00000426885 215 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 HSPE1P13-201ENST00000451143 297 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AC091544.4-201ENST00000555268 342 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG3Q9NT62 CYP4A27P-201ENST00000567218 190 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 AC107294.3-201ENST00000609211 526 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 SNORD98-201ENST00000636377 67 ntBASIC3.7□□□□□ -1.82
ATG3Q9NT62 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
ATG3Q9NT62 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG3Q9NT62 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG3Q9NT62 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ATG3Q9NT62 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG3Q9NT62 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG3Q9NT62 Y_RNA.309-201ENST00000365046 111 ntBASIC3.69□□□□□ -1.82
ATG3Q9NT62 DYNLT3P1-201ENST00000378574 347 ntBASIC3.69□□□□□ -1.82
ATG3Q9NT62 Y_RNA.521-201ENST00000384560 114 ntBASIC3.69□□□□□ -1.82
ATG3Q9NT62 RNU6-855P-201ENST00000410395 104 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms