Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.72□□□□□ -2.13
Q9N2K0 AC006600.1-201ENST00000572529 153 ntBASIC1.72□□□□□ -2.13
Q9N2K0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
Q9N2K0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.72□□□□□ -2.13
Q9N2K0 AC092447.9-201ENST00000603395 144 ntBASIC1.72□□□□□ -2.13
Q9N2K0 AL050343.2-201ENST00000607338 280 ntBASIC1.72□□□□□ -2.13
Q9N2K0 MIR3674-201ENST00000636576 68 ntBASIC1.72□□□□□ -2.13
Q9N2K0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Q9N2K0 Y_RNA.5-201ENST00000362334 102 ntBASIC1.71□□□□□ -2.14
Q9N2K0 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
Q9N2K0 SNORD42.2-201ENST00000365570 69 ntBASIC1.71□□□□□ -2.14
Q9N2K0 Y_RNA.496-201ENST00000384444 101 ntBASIC1.71□□□□□ -2.14
Q9N2K0 Y_RNA.535-201ENST00000384612 99 ntBASIC1.71□□□□□ -2.14
Q9N2K0 RNU6-417P-201ENST00000384712 107 ntBASIC1.71□□□□□ -2.14
Q9N2K0 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
Q9N2K0 RNU4-53P-201ENST00000410828 140 ntBASIC1.71□□□□□ -2.14
Q9N2K0 Y_RNA.639-201ENST00000458981 102 ntBASIC1.71□□□□□ -2.14
Q9N2K0 RNU6-475P-201ENST00000516073 104 ntBASIC1.71□□□□□ -2.14
Q9N2K0 MIR3945-201ENST00000581853 98 ntBASIC1.71□□□□□ -2.14
Q9N2K0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.71□□□□□ -2.14
Q9N2K0 AL606534.2-204ENST00000635008 178 ntBASIC1.71□□□□□ -2.14
Q9N2K0 AC010615.1-201ENST00000594254 1764 ntBASIC1.71□□□□□ -2.14
Q9N2K0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Q9N2K0 RNY3P11-201ENST00000364153 102 ntBASIC1.7□□□□□ -2.14
Q9N2K0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.7□□□□□ -2.14
Q9N2K0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Q9N2K0 RNU11-5P-201ENST00000391216 129 ntBASIC1.7□□□□□ -2.14
Q9N2K0 MIR1261-201ENST00000408659 82 ntBASIC1.7□□□□□ -2.14
Q9N2K0 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
Q9N2K0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.7□□□□□ -2.14
Q9N2K0 AL137792.2-201ENST00000443484 235 ntBASIC1.7□□□□□ -2.14
Q9N2K0 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
Q9N2K0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.7□□□□□ -2.14
Q9N2K0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.7□□□□□ -2.14
Q9N2K0 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
Q9N2K0 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
Q9N2K0 MIR6715A-201ENST00000615929 79 ntBASIC1.7□□□□□ -2.14
Q9N2K0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Q9N2K0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Q9N2K0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Q9N2K0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.69□□□□□ -2.14
Q9N2K0 RNU6-271P-201ENST00000363858 105 ntBASIC1.69□□□□□ -2.14
Q9N2K0 RNA5SP323-201ENST00000391094 133 ntBASIC1.69□□□□□ -2.14
Q9N2K0 AC010154.1-201ENST00000425857 269 ntBASIC1.69□□□□□ -2.14
Q9N2K0 SDAD1P3-201ENST00000427380 333 ntBASIC1.69□□□□□ -2.14
Q9N2K0 SNORD65B-201ENST00000459126 73 ntBASIC1.69□□□□□ -2.14
Q9N2K0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
Q9N2K0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Q9N2K0 RNU1-142P-201ENST00000516682 145 ntBASIC1.69□□□□□ -2.14
Q9N2K0 RNU4-77P-201ENST00000516692 156 ntBASIC1.69□□□□□ -2.14
Q9N2K0 IGKV3-31-201ENST00000523109 329 ntBASIC1.69□□□□□ -2.14
Q9N2K0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.69□□□□□ -2.14
Q9N2K0 AC084364.2-201ENST00000546924 395 ntBASIC1.69□□□□□ -2.14
Q9N2K0 AL359075.3-201ENST00000613288 217 ntBASIC1.69□□□□□ -2.14
Q9N2K0 uc_338.22-201ENST00000622722 187 ntBASIC1.69□□□□□ -2.14
Q9N2K0 MIR6873-201ENST00000622788 63 ntBASIC1.69□□□□□ -2.14
Q9N2K0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Q9N2K0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Q9N2K0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Q9N2K0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Q9N2K0 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
Q9N2K0 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
Q9N2K0 Y_RNA.419-201ENST00000384041 102 ntBASIC1.68□□□□□ -2.14
Q9N2K0 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
Q9N2K0 SUMO2P12-201ENST00000405924 140 ntBASIC1.68□□□□□ -2.14
Q9N2K0 RNU2-7P-201ENST00000410794 178 ntBASIC1.68□□□□□ -2.14
Q9N2K0 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
Q9N2K0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.68□□□□□ -2.14
Q9N2K0 AC245047.4-201ENST00000433189 144 ntBASIC1.68□□□□□ -2.14
Q9N2K0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.68□□□□□ -2.14
Q9N2K0 CHEK2P4-201ENST00000450340 246 ntBASIC1.68□□□□□ -2.14
Q9N2K0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.68□□□□□ -2.14
Q9N2K0 AC010409.1-201ENST00000487382 476 ntBASIC1.68□□□□□ -2.14
Q9N2K0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.68□□□□□ -2.14
Q9N2K0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.68□□□□□ -2.14
Q9N2K0 AC093852.1-201ENST00000503587 266 ntBASIC1.68□□□□□ -2.14
Q9N2K0 RNU6-408P-201ENST00000515910 100 ntBASIC1.68□□□□□ -2.14
Q9N2K0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.68□□□□□ -2.14
Q9N2K0 AC104984.5-201ENST00000586878 94 ntBASIC1.68□□□□□ -2.14
Q9N2K0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
Q9N2K0 RPS29P30-201ENST00000600975 111 ntBASIC1.68□□□□□ -2.14
Q9N2K0 AL590808.1-201ENST00000618696 141 ntBASIC1.68□□□□□ -2.14
Q9N2K0 U6.73-201ENST00000619194 103 ntBASIC1.68□□□□□ -2.14
Q9N2K0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Q9N2K0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Q9N2K0 SNORD114-7-201ENST00000362520 77 ntBASIC1.67□□□□□ -2.14
Q9N2K0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.67□□□□□ -2.14
Q9N2K0 Y_RNA.445-201ENST00000384168 102 ntBASIC1.67□□□□□ -2.14
Q9N2K0 RNY1P14-201ENST00000384426 108 ntBASIC1.67□□□□□ -2.14
Q9N2K0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Q9N2K0 AC096644.2-201ENST00000429278 159 ntBASIC1.67□□□□□ -2.14
Q9N2K0 FTH1P12-201ENST00000432137 551 ntBASIC1.67□□□□□ -2.14
Q9N2K0 AL160004.2-201ENST00000432935 350 ntBASIC1.67□□□□□ -2.14
Q9N2K0 RPL26P26-201ENST00000480251 434 ntBASIC1.67□□□□□ -2.14
Q9N2K0 SNORA31.17-201ENST00000516953 127 ntBASIC1.67□□□□□ -2.14
Q9N2K0 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
Q9N2K0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Q9N2K0 MIR5188-201ENST00000583467 113 ntBASIC1.67□□□□□ -2.14
Q9N2K0 AC006157.1-201ENST00000611750 366 ntBASIC1.67□□□□□ -2.14
Q9N2K0 AC064859.1-201ENST00000624741 174 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms