Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNA5SP437-201ENST00000517249 129 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 SNRPGP18-201ENST00000553000 214 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 AC022432.1-201ENST00000595739 310 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 AC090971.5-201ENST00000621102 293 ntBASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
CHMP1AQ9HD42 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 RNA5SP289-201ENST00000362332 137 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.39-201ENST00000362620 98 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 SNORA20B-201ENST00000384220 132 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 RNU6-474P-201ENST00000384243 107 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.460-201ENST00000384255 102 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 RNU6-308P-201ENST00000390957 107 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 SNORD78.2-201ENST00000391076 69 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 RNA5SP475-201ENST00000410568 110 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC027419.1-201ENST00000522976 328 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 MIR4659A-201ENST00000580269 81 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 AC006157.1-201ENST00000611750 366 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 U6.73-201ENST00000619194 103 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.76□□□□□ -2.13
CHMP1AQ9HD42 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 MIR515-2-201ENST00000384883 83 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 MIR515-1-201ENST00000384884 83 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 MRPL35P1-201ENST00000404272 572 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 PMCHL1-202ENST00000423102 261 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AL163195.1-201ENST00000496941 348 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AC010598.1-201ENST00000510378 103 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 SNORA40.14-201ENST00000516543 86 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 AC240442.1-201ENST00000616055 283 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 U6.115-201ENST00000636045 103 ntBASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHMP1AQ9HD42 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 NDUFB4P4-201ENST00000404822 243 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 MTCO3P19-201ENST00000415864 321 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 MCFD2P1-201ENST00000417812 300 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AL160004.2-201ENST00000432935 350 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AC005002.2-201ENST00000438228 269 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AC023442.1-201ENST00000531247 422 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AC023157.2-201ENST00000540596 141 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AL137100.2-201ENST00000555786 315 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 AC004467.1-201ENST00000615678 330 ntBASIC1.74□□□□□ -2.13
CHMP1AQ9HD42 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.138-201ENST00000363462 102 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 SNORA72.2-201ENST00000365028 127 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RNU6-20P-201ENST00000384106 107 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RNU6-1310P-201ENST00000384153 107 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RNU6-1186P-201ENST00000410429 97 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RNU4-53P-201ENST00000410828 140 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AL121890.1-201ENST00000435457 205 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 HSPE1P9-201ENST00000440046 311 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AL606517.2-201ENST00000442855 241 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 MTND4P19-201ENST00000446659 478 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 MRPS10P1-201ENST00000448483 130 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RPS26P45-201ENST00000471748 340 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 TRBV12-1-201ENST00000479785 344 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RN7SKP295-201ENST00000517264 153 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AC024995.1-201ENST00000523014 93 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 GNAI2P1-201ENST00000541815 315 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AC005828.6-201ENST00000606610 232 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AL359075.3-201ENST00000613288 217 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AC006435.5-201ENST00000624486 112 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 AC091812.1-201ENST00000432235 1948 ntBASIC1.73□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.101-201ENST00000363154 102 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 RNU6-626P-201ENST00000363354 107 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.243-201ENST00000364481 109 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 Y_RNA.445-201ENST00000384168 102 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 RNA5SP323-201ENST00000391094 133 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 AL135786.1-201ENST00000415892 214 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 EBAG9P1-201ENST00000418955 543 ntBASIC1.72□□□□□ -2.13
CHMP1AQ9HD42 SDAD1P3-201ENST00000427380 333 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms