Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.415-201ENST00000384012 112 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.512-201ENST00000384518 102 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 MIR628-201ENST00000385229 95 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 MIR1294-201ENST00000408503 142 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 SNORD12B-201ENST00000410433 91 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 RNU6-966P-201ENST00000516479 104 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC131281.1-201ENST00000522984 164 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.07□□□□□ -2.08
UPF2Q9HAU5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC136932.1-201ENST00000574771 208 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC010999.1-201ENST00000611856 324 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC240442.1-201ENST00000616055 283 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 AC010205.1-201ENST00000616668 449 ntBASIC2.07□□□□□ -2.08
UPF2Q9HAU5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.07□□□□□ -2.08
UPF2Q9HAU5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
UPF2Q9HAU5 MTND5P35-201ENST00000557537 1720 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 MIR340-201ENST00000362125 95 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU6-1309P-201ENST00000363305 108 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 SNORD87-201ENST00000364849 89 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 SNORA25B-201ENST00000365507 128 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.424-201ENST00000384063 103 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU6-926P-201ENST00000384075 107 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.459-201ENST00000384251 102 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.551-201ENST00000384661 102 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU2-32P-201ENST00000411193 191 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 MTCO3P19-201ENST00000415864 321 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 SDAD1P3-201ENST00000427380 333 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 CBX3P6-201ENST00000430257 527 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AC009237.7-201ENST00000447357 229 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AC007395.1-201ENST00000451333 677 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU6-397P-201ENST00000516226 104 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU6-1198P-201ENST00000516904 67 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AC026470.2-201ENST00000561492 181 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 MIR4659A-201ENST00000580269 81 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 MIR5006-201ENST00000583027 110 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AL355297.3-201ENST00000604082 446 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.06□□□□□ -2.08
UPF2Q9HAU5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.06□□□□□ -2.08
UPF2Q9HAU5 RNU6-280P-201ENST00000364145 104 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.210-201ENST00000364161 110 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.380-201ENST00000365663 111 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 RNU6-793P-201ENST00000384233 104 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.471-201ENST00000384312 102 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 MIR1261-201ENST00000408659 82 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 MRPS35P2-201ENST00000508242 191 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.05□□□□□ -2.08
UPF2Q9HAU5 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 RNU6-344P-201ENST00000516635 111 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 RNU6-897P-201ENST00000517135 105 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.721-201ENST00000517207 102 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 AC022616.8-201ENST00000533569 253 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 AL031274.2-201ENST00000599419 203 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 AL390123.1-201ENST00000603216 237 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 AL162730.1-201ENST00000605734 292 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.05□□□□□ -2.08
UPF2Q9HAU5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
UPF2Q9HAU5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNU1-62P-201ENST00000362599 164 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNU6-545P-201ENST00000362681 104 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.222-201ENST00000364264 102 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 SNORD78.2-201ENST00000391076 69 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 MRPL35P1-201ENST00000404272 572 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC073910.1-201ENST00000445047 438 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC055731.1-201ENST00000474387 401 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 HMGN2P9-201ENST00000476875 229 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 Y_RNA.683-201ENST00000516508 93 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC091144.1-201ENST00000519573 138 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 SNRPGP20-201ENST00000604477 205 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AL121655.1-201ENST00000605811 308 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 AC008873.1-201ENST00000625051 138 ntBASIC2.04□□□□□ -2.08
UPF2Q9HAU5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UPF2Q9HAU5 RNU4-50P-201ENST00000364361 141 ntBASIC2.03□□□□□ -2.08
UPF2Q9HAU5 RNU6-546P-201ENST00000383991 107 ntBASIC2.03□□□□□ -2.08
UPF2Q9HAU5 RNU6-611P-201ENST00000384276 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms