Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU7-169P-201ENST00000459456 61 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC067942.3-201ENST00000512025 362 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RNU6-856P-201ENST00000516959 98 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RPL17P51-201ENST00000605218 238 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC130454.1-201ENST00000622948 401 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AL159152.1-201ENST00000635019 2587 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 MTND5P35-201ENST00000557537 1720 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1115P-201ENST00000362490 106 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-862P-201ENST00000362804 105 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-793P-201ENST00000384233 104 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1145P-201ENST00000384246 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.577-201ENST00000384794 101 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-700P-201ENST00000391043 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 MIR300-201ENST00000401138 83 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.592-201ENST00000410274 109 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-57P-201ENST00000411348 103 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC007395.1-201ENST00000451333 677 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU1-131P-201ENST00000458943 161 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC027575.1-201ENST00000481064 460 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC022868.1-201ENST00000517767 391 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC055872.1-201ENST00000570978 278 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC005899.2-201ENST00000584353 90 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC010999.1-201ENST00000611856 324 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC006001.4-201ENST00000622243 395 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC091925.1-201ENST00000623204 462 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC068205.3-201ENST00000636385 468 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AC010409.1-201ENST00000487382 476 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR4753-201ENST00000585119 83 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 7SK.7-201ENST00000603504 247 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL078596.1-201ENST00000624856 447 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.31-201ENST00000362574 102 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-1301P-201ENST00000362724 104 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-879P-201ENST00000364328 108 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MTND2P29-201ENST00000438595 412 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC245102.2-201ENST00000448956 180 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-966P-201ENST00000516479 104 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC025647.1-201ENST00000517879 253 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SUB1P4-201ENST00000566062 339 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR5094-201ENST00000578766 85 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC073544.1-201ENST00000600110 1595 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR369-201ENST00000362155 70 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-961P-201ENST00000363893 105 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-280P-201ENST00000364145 104 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms