Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU7-169P-201ENST00000459456 61 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC067942.3-201ENST00000512025 362 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RNU6-856P-201ENST00000516959 98 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.36□□□□□ -2.19
NANOGQ9H9S0 RPL17P51-201ENST00000605218 238 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AC130454.1-201ENST00000622948 401 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 AL159152.1-201ENST00000635019 2587 ntBASIC1.36□□□□□ -2.19
NANOGQ9H9S0 MTND5P35-201ENST00000557537 1720 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1115P-201ENST00000362490 106 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-862P-201ENST00000362804 105 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-793P-201ENST00000384233 104 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-1145P-201ENST00000384246 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.577-201ENST00000384794 101 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-700P-201ENST00000391043 107 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 MIR300-201ENST00000401138 83 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.592-201ENST00000410274 109 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU6-57P-201ENST00000411348 103 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC007395.1-201ENST00000451333 677 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU1-131P-201ENST00000458943 161 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC027575.1-201ENST00000481064 460 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC022868.1-201ENST00000517767 391 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC055872.1-201ENST00000570978 278 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC005899.2-201ENST00000584353 90 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC010999.1-201ENST00000611856 324 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC006001.4-201ENST00000622243 395 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC091925.1-201ENST00000623204 462 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 AC068205.3-201ENST00000636385 468 ntBASIC1.35□□□□□ -2.19
NANOGQ9H9S0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
NANOGQ9H9S0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AC010409.1-201ENST00000487382 476 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 MIR4753-201ENST00000585119 83 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 7SK.7-201ENST00000603504 247 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 AL078596.1-201ENST00000624856 447 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
NANOGQ9H9S0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.31-201ENST00000362574 102 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-1301P-201ENST00000362724 104 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-879P-201ENST00000364328 108 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MTND2P29-201ENST00000438595 412 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC245102.2-201ENST00000448956 180 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 RNU6-966P-201ENST00000516479 104 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC025647.1-201ENST00000517879 253 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 SUB1P4-201ENST00000566062 339 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR5094-201ENST00000578766 85 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 AC073544.1-201ENST00000600110 1595 ntBASIC1.33□□□□□ -2.2
NANOGQ9H9S0 MIR369-201ENST00000362155 70 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-961P-201ENST00000363893 105 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-280P-201ENST00000364145 104 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms