Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.35□□□□□ -2.03
CDT1Q9H211 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
CDT1Q9H211 AL442067.1-201ENST00000613261 223 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDT1Q9H211 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
CDT1Q9H211 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDT1Q9H211 AL391987.6-201ENST00000305671 199 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 SNORD27-201ENST00000363981 72 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 Y_RNA.489-201ENST00000384410 101 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 Y_RNA.581-201ENST00000391017 97 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 MRPL35P1-201ENST00000404272 572 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AL603910.2-201ENST00000407268 136 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 RNU2-32P-201ENST00000411193 191 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 ELOCP21-201ENST00000412558 336 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 RPL23AP3-201ENST00000453844 468 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AC091179.3-201ENST00000474761 144 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AC108210.2-201ENST00000503681 201 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 SNORA40.9-201ENST00000515895 93 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 RNU6-1023P-201ENST00000516137 106 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 RNU2-44P-201ENST00000516795 194 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 IGKV3-31-201ENST00000523109 329 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AP002001.1-203ENST00000534002 267 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AC018630.3-201ENST00000542637 96 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.34□□□□□ -2.03
CDT1Q9H211 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.34□□□□□ -2.03
CDT1Q9H211 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 AC005562.2-201ENST00000618264 111 ntBASIC2.34□□□□□ -2.03
CDT1Q9H211 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.04
CDT1Q9H211 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CDT1Q9H211 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.04
CDT1Q9H211 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CDT1Q9H211 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.33□□□□□ -2.04
CDT1Q9H211 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDT1Q9H211 SNORD81.1-201ENST00000363064 77 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 RNU6-727P-201ENST00000363592 107 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 Y_RNA.277-201ENST00000364754 102 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 SNORA20.1-201ENST00000364790 130 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 RNU6-546P-201ENST00000383991 107 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 SNORD63-201ENST00000384262 68 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CDT1Q9H211 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
CDT1Q9H211 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 RNU6-1098P-201ENST00000516772 96 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 AK6P2-201ENST00000549020 471 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 MIR4423-201ENST00000580922 80 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 MIR5006-201ENST00000583027 110 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 MIR1248-201ENST00000629190 106 ntBASIC2.33□□□□□ -2.04
CDT1Q9H211 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.33□□□□□ -2.04
CDT1Q9H211 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDT1Q9H211 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
CDT1Q9H211 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDT1Q9H211 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDT1Q9H211 ZNF271P-202ENST00000465539 1970 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDT1Q9H211 RNU6-280P-201ENST00000364145 104 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 Y_RNA.446-201ENST00000384178 104 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 RNU6-651P-201ENST00000411040 105 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
CDT1Q9H211 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.32□□□□□ -2.04
CDT1Q9H211 AC022616.8-201ENST00000533569 253 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 AC026470.2-201ENST00000561492 181 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.32□□□□□ -2.04
CDT1Q9H211 AC010999.1-201ENST00000611856 324 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 TCL6_2.1-201ENST00000615162 119 ntBASIC2.32□□□□□ -2.04
CDT1Q9H211 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.32□□□□□ -2.04
CDT1Q9H211 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 MIR335-201ENST00000362173 94 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 Y_RNA.101-201ENST00000363154 102 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 Y_RNA.416-201ENST00000384014 113 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 RNU6-245P-201ENST00000384020 107 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 MIR561-201ENST00000385216 97 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 RNU2-48P-201ENST00000410694 191 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.31□□□□□ -2.04
CDT1Q9H211 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.31□□□□□ -2.04
CDT1Q9H211 AC096920.1-201ENST00000423991 241 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 AC018868.1-201ENST00000491307 315 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.31□□□□□ -2.04
CDT1Q9H211 RNU5F-4P-201ENST00000516581 114 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.31□□□□□ -2.04
CDT1Q9H211 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.31□□□□□ -2.04
CDT1Q9H211 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
CDT1Q9H211 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDT1Q9H211 Y_RNA.20-201ENST00000362479 113 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 Y_RNA.65-201ENST00000362846 100 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 Y_RNA.179-201ENST00000363844 90 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RNU6-743P-201ENST00000364151 106 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 Y_RNA.269-201ENST00000364685 89 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RNU6-234P-201ENST00000365229 104 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 Y_RNA.570-201ENST00000384750 101 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RNA5SP504-201ENST00000410676 117 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RNU6-1199P-201ENST00000411249 104 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms