Protein–RNA interactions for Protein: Q9H1J1

UPF3A, Regulator of nonsense transcripts 3A, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AQ9H1J1 RNU1-76P-201ENST00000362903 159 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.153-201ENST00000363615 91 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNU6-26P-201ENST00000383985 107 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNU6-639P-201ENST00000384074 107 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNU6-541P-201ENST00000384709 110 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNU6-130P-201ENST00000411112 103 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 MTND2P23-201ENST00000422990 651 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 U8.20-201ENST00000459445 131 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 RNA5SP54-201ENST00000516951 92 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 SNORA48.11-201ENST00000517015 89 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AC093023.1-201ENST00000547375 507 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AK6P2-201ENST00000549020 471 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AC090517.1-201ENST00000569307 266 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 MZT1P2-201ENST00000604387 248 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 PART1_1.1-201ENST00000611761 217 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AC005562.2-201ENST00000618264 111 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 U6.92-201ENST00000636464 89 ntBASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.89□□□□□ -2.11
UPF3AQ9H1J1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 SNORA67.2-201ENST00000384300 149 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 RNY3P4-201ENST00000384428 101 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 RNU6-985P-201ENST00000410182 104 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AC004386.2-201ENST00000441858 148 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 SNORA25.14-201ENST00000516481 132 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AC040926.1-201ENST00000530195 238 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AC113195.1-201ENST00000579952 141 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AL512598.1-201ENST00000610158 273 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AL021879.1-201ENST00000611756 288 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AC005296.1-201ENST00000616145 209 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.88□□□□□ -2.11
UPF3AQ9H1J1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RNU6-879P-201ENST00000364328 108 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RNU2-32P-201ENST00000411193 191 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 CBX3P6-201ENST00000430257 527 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 MIR4529-201ENST00000578110 78 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 AC011476.5-201ENST00000615594 130 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 AL078596.1-201ENST00000624856 447 ntBASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-727P-201ENST00000363592 107 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 SNORD14.1-201ENST00000365609 90 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-245P-201ENST00000384020 107 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 MIR499A-201ENST00000384903 122 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC009237.7-201ENST00000447357 229 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC010655.3-201ENST00000478818 450 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RPL26P26-201ENST00000480251 434 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC093852.1-201ENST00000503587 266 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 HMGB3P17-201ENST00000504195 649 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-327P-201ENST00000516270 127 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-764P-201ENST00000516396 105 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RN7SKP49-201ENST00000516675 260 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 MIR2355-201ENST00000517199 87 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RRN3P3-201ENST00000549207 578 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC026470.2-201ENST00000561492 181 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AC006504.6-201ENST00000590142 199 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RAC1P9-201ENST00000604990 392 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 MIR7111-201ENST00000619751 72 ntBASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3AQ9H1J1 RNU6-234P-201ENST00000365229 104 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 SNORA25B-201ENST00000365507 128 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 AC117470.1-201ENST00000381974 330 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 RNU6-546P-201ENST00000383991 107 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 MIR628-201ENST00000385229 95 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 MIR548F4-201ENST00000408515 105 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 ELOCP21-201ENST00000412558 336 ntBASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.85□□□□□ -2.11
UPF3AQ9H1J1 RPEP5-201ENST00000441137 268 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms