Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-1318P-201ENST00000365389 103 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 RNU6-443P-201ENST00000384780 107 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 SNORD65B-201ENST00000459126 73 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 RPS27AP9-201ENST00000477681 438 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 SNORA27.4-201ENST00000516650 95 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 MIR4319-201ENST00000577285 85 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 RNU6-271P-201ENST00000363858 105 ntBASIC3.02□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.515-201ENST00000384535 112 ntBASIC3.02□□□□□ -1.93
CCDC113Q9H0I3 MIR9-1-201ENST00000385198 89 ntBASIC3.02□□□□□ -1.93
CCDC113Q9H0I3 AC108938.1-201ENST00000451204 136 ntBASIC3.02□□□□□ -1.93
CCDC113Q9H0I3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC113Q9H0I3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 MIR26A1-201ENST00000362205 77 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 RNU6-407P-201ENST00000365280 104 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 SNORA20B-201ENST00000384220 132 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 RNU6-160P-201ENST00000384591 107 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 AC108059.2-201ENST00000434626 151 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 RNU6-191P-201ENST00000516295 94 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 ZNF861P-201ENST00000588126 639 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 AC078938.1-201ENST00000620993 318 ntBASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC113Q9H0I3 AL159152.1-201ENST00000635019 2587 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 SNORD115-3-201ENST00000363100 82 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AL355796.1-201ENST00000406706 323 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 AL121890.1-201ENST00000435457 205 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 AL139109.1-201ENST00000455491 297 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 RNU6-1146P-201ENST00000516282 102 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 RNU6-111P-201ENST00000517179 105 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 MIR4672-201ENST00000583126 81 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AL162424.1-201ENST00000602325 221 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 AC005828.6-201ENST00000606610 232 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 SCARNA15.3-201ENST00000626315 122 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 SCARNA4.1-201ENST00000628597 123 ntBASIC3□□□□□ -1.93
CCDC113Q9H0I3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC113Q9H0I3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CCDC113Q9H0I3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RNU6-740P-201ENST00000364734 105 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RNU6-338P-201ENST00000383888 105 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RNU6-662P-201ENST00000384253 104 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MIR873-201ENST00000401120 77 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MIR1262-201ENST00000408276 93 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 AL109933.2-201ENST00000452651 260 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 SNORD109B-201ENST00000458961 67 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 SNORD109A-201ENST00000459128 67 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RN7SL499P-201ENST00000481141 276 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 RNU6-856P-201ENST00000516959 98 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MIR3605-201ENST00000583214 100 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MIR4658-201ENST00000584344 65 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 AC141273.2-201ENST00000618989 130 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC113Q9H0I3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC131280.1-202ENST00000624067 4211 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 RNU6-855P-201ENST00000410395 104 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 RNU2-52P-201ENST00000410680 190 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 RN7SKP284-201ENST00000411002 343 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 SNORA59A-201ENST00000459326 152 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 RPS27P22-201ENST00000478056 241 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 RNU6-794P-201ENST00000517261 64 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC087441.2-201ENST00000529141 262 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 MIR3668-201ENST00000582138 75 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC006023.1-201ENST00000603944 259 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 MIR6852-201ENST00000621699 66 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 AC006435.5-201ENST00000624486 112 ntBASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC113Q9H0I3 UBE2WP1-201ENST00000362030 340 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 SNORD114-7-201ENST00000362520 77 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 SNORA27.1-201ENST00000362604 124 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 AL590004.2-201ENST00000404787 371 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 RNU2-61P-201ENST00000411069 191 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 RNA5SP184-201ENST00000411071 108 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms