Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNU6-458P-201ENST00000384179 107 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA51.9-201ENST00000384295 124 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR136-201ENST00000385207 82 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR1204-201ENST00000408388 67 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD100-201ENST00000408573 76 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SKP286-201ENST00000410894 299 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 CKS1BP5-201ENST00000434172 273 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 HMGN2P34-201ENST00000437647 269 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 HMGN2P16-201ENST00000456802 261 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AL031183.1-201ENST00000457667 207 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD42B-201ENST00000458893 67 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL714P-201ENST00000487050 298 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC104619.4-201ENST00000510773 249 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-287P-201ENST00000516230 98 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP438-201ENST00000516561 112 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU7-28P-201ENST00000516759 62 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 IGKV3D-25-201ENST00000519599 235 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC107958.1-201ENST00000556576 290 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR3921-201ENST00000577308 85 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD95-201ENST00000579879 68 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR548H5-201ENST00000580314 60 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL230P-201ENST00000580835 303 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 FKBP1AP1-201ENST00000594588 318 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AL136131.3-201ENST00000607600 188 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 U6.58-201ENST00000613107 107 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC025574.2-201ENST00000615621 514 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 Six3os1_4.1-201ENST00000615706 324 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL722P-201ENST00000617780 284 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL565P-201ENST00000618246 284 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 U1.31-201ENST00000620022 160 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AL591926.1-201ENST00000620542 217 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC022400.9-201ENST00000623633 273 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 AC006971.1-201ENST00000407916 4486 ntBASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
KRTAP4-4Q9BYR3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC009779.8-201ENST00000641684 4384 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC140134.1-201ENST00000511830 3544 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AL121839.2-201ENST00000565058 6943 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AL022323.4-201ENST00000623980 13120 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms