Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 RNU6-91P-201ENST00000607774 107 ntBASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.79□□□□□ -1.8
COL25A1Q9BXS0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 Y_RNA.298-201ENST00000364960 107 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 SNORD24-201ENST00000383884 75 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6-816P-201ENST00000390914 107 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 SNORD17-201ENST00000390930 237 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6-1268P-201ENST00000391214 107 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6-1239P-201ENST00000391310 107 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6-402P-201ENST00000410678 103 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 AC107626.1-201ENST00000471084 183 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 MIR3199-2-201ENST00000636243 86 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 MIR376A2-201ENST00000636782 80 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 AC007496.3-201ENST00000624987 3443 ntBASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
COL25A1Q9BXS0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 SNORD115-13-201ENST00000363358 82 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 SNORD115-16-201ENST00000363887 82 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 SNORD115-1-201ENST00000364961 82 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 RNU6-1104P-201ENST00000384723 104 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 AC108751.2-201ENST00000469993 231 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 SUMO2P16-201ENST00000519475 264 ntBASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL25A1Q9BXS0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 RNU6-349P-201ENST00000362402 107 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 RNU6-690P-201ENST00000365242 106 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 SNORA70B-201ENST00000384210 135 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 MIR548A2-201ENST00000384956 97 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 AC004941.2-201ENST00000427009 228 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 S100A11P1-201ENST00000477525 312 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 MRPS17P9-201ENST00000511924 393 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 RNU6-267P-201ENST00000516714 103 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 MIR3163-201ENST00000581592 73 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 AC012531.4-201ENST00000616509 177 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 AC026241.1-201ENST00000517873 2142 ntBASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL25A1Q9BXS0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 Y_RNA.10-201ENST00000362371 110 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 SNORA33-201ENST00000363664 130 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 RNU6-219P-201ENST00000364728 107 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 SNORD116-22-201ENST00000384430 92 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 RNU6-748P-201ENST00000384648 107 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 RPL23AP48-201ENST00000406913 488 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 MIR1283-1-201ENST00000408494 87 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 RNA5SP306-201ENST00000411087 107 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 HLA-N-201ENST00000437516 135 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 AC069285.2-201ENST00000440210 275 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 MIR5197-201ENST00000583721 112 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 AC091152.3-201ENST00000604227 325 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 AC021443.1-201ENST00000604478 211 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 JPX_2.1-201ENST00000614161 69 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 AC006435.5-201ENST00000624486 112 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms