Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.259-201ENST00000364619 101 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 RNU6-890P-201ENST00000384121 107 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 RNU6-439P-201ENST00000384188 106 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 RNA5SP213-201ENST00000391031 106 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 SNORA75.6-201ENST00000391318 127 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 AC016909.1-201ENST00000415916 166 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 AC245047.4-201ENST00000433189 144 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 UQCRBP2-201ENST00000447827 297 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 MTCO3P10-201ENST00000455912 772 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 HMGN1P13-201ENST00000505795 138 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 AC133104.2-201ENST00000615272 193 ntBASIC1.56□□□□□ -2.16
CCM2Q9BSQ5 RNA5SP361-201ENST00000362686 118 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNU6-296P-201ENST00000384608 107 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 MIR329-1-201ENST00000385028 80 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 MIR625-201ENST00000385047 85 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNA5SP467-201ENST00000391274 118 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 MTCYBP4-201ENST00000401524 249 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNU6-1156P-201ENST00000410365 100 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 MTND5P20-201ENST00000448677 143 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RPL36AP21-201ENST00000490372 323 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 AL117351.2-201ENST00000513571 157 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNU6-507P-201ENST00000516045 100 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNU6-277P-201ENST00000516272 106 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 RNU6-875P-201ENST00000516488 106 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 AC027419.1-201ENST00000522976 328 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 AC025253.1-201ENST00000613623 543 ntBASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCM2Q9BSQ5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.356-201ENST00000365475 113 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.577-201ENST00000384794 101 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 RNU6-1009P-201ENST00000390996 107 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 HSPE1P9-201ENST00000440046 311 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 RNU6-470P-201ENST00000515954 104 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 RNA5SP437-201ENST00000517249 129 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 CYCSP23-201ENST00000519781 313 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AL132765.2-201ENST00000610812 351 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC084781.2-201ENST00000615568 161 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC104260.1-201ENST00000616660 539 ntBASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.54□□□□□ -2.16
CCM2Q9BSQ5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 RNU6-1145P-201ENST00000384246 107 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 SNORA69.1-201ENST00000390904 137 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AC069257.2-201ENST00000441819 155 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AC073910.1-201ENST00000445047 438 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 PCNPP5-201ENST00000452246 481 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 RNU7-169P-201ENST00000459456 61 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AC105758.1-201ENST00000506038 399 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 Y_RNA.702-201ENST00000516843 96 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AL355375.2-201ENST00000574825 175 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AL357075.2-201ENST00000614906 189 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
CCM2Q9BSQ5 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.17
CCM2Q9BSQ5 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 SNORA72.2-201ENST00000365028 127 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 Y_RNA.529-201ENST00000384586 119 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 RN7SKP49-201ENST00000516675 260 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 SUB1P3-201ENST00000564581 315 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.52□□□□□ -2.17
CCM2Q9BSQ5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 RNU6-661P-201ENST00000362409 107 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 RNU6-318P-201ENST00000384283 103 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 RNY4P36-201ENST00000391116 96 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 Y_RNA.605-201ENST00000410577 105 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 TOMM22P2-201ENST00000430735 237 ntBASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.51□□□□□ -2.17
CCM2Q9BSQ5 AC112492.4-201ENST00000456549 352 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms