Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
VRK1Q99986 RPS29P6-201ENST00000438196 145 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.52□□□□□ -2.01
VRK1Q99986 SUMO2P18-201ENST00000518873 252 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 RPL21P9-201ENST00000556149 474 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 MIR3145-201ENST00000580727 82 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.15-201ENST00000611544 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.16-201ENST00000613119 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.12-201ENST00000613778 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.20-201ENST00000613956 192 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.9-201ENST00000615427 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.11-201ENST00000616345 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.2-201ENST00000616535 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.3-201ENST00000617785 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.19-201ENST00000618602 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 RNU2-1-201ENST00000618664 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.6-201ENST00000619225 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.5-201ENST00000619465 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 U2.10-201ENST00000620268 191 ntBASIC2.52□□□□□ -2.01
VRK1Q99986 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
VRK1Q99986 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.52□□□□□ -2.01
VRK1Q99986 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VRK1Q99986 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VRK1Q99986 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VRK1Q99986 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VRK1Q99986 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VRK1Q99986 RNU6-160P-201ENST00000384591 107 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.51□□□□□ -2.01
VRK1Q99986 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.51□□□□□ -2.01
VRK1Q99986 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK1Q99986 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 AL353689.1-201ENST00000438895 199 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 RPL23AP7-203ENST00000449021 469 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 RNU6-388P-201ENST00000517012 105 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 RNU6-389P-201ENST00000517048 105 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.51□□□□□ -2.01
VRK1Q99986 AC004486.1-201ENST00000546846 233 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 AC007318.2-201ENST00000620999 243 ntBASIC2.51□□□□□ -2.01
VRK1Q99986 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VRK1Q99986 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.51□□□□□ -2.01
VRK1Q99986 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.51□□□□□ -2.01
VRK1Q99986 AL035425.3-201ENST00000564206 4996 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VRK1Q99986 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VRK1Q99986 SNORD27-201ENST00000363981 72 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 Y_RNA.217-201ENST00000364214 105 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 Y_RNA.277-201ENST00000364754 102 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 SNORA9.2-201ENST00000365361 133 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU6-1318P-201ENST00000365389 103 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 Y_RNA.500-201ENST00000384466 111 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU6-851P-201ENST00000384565 107 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.5□□□□□ -2.01
VRK1Q99986 AC060773.1-201ENST00000421698 310 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 HSPE1P13-201ENST00000451143 297 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.5□□□□□ -2.01
VRK1Q99986 Y_RNA.641-201ENST00000459414 105 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU6-1146P-201ENST00000516282 102 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 RNU6-111P-201ENST00000517179 105 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 GTF3AP2-201ENST00000557014 266 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
VRK1Q99986 MIR3126-201ENST00000577443 74 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 AL162424.1-201ENST00000602325 221 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 AL049779.4-201ENST00000604500 156 ntBASIC2.5□□□□□ -2.01
VRK1Q99986 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
VRK1Q99986 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.5□□□□□ -2.01
VRK1Q99986 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK1Q99986 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.54-201ENST00000362766 105 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.82-201ENST00000363000 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.92-201ENST00000363043 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 RNY1-201ENST00000364228 113 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 SNORD114-6-201ENST00000364393 72 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.235-201ENST00000364412 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.257-201ENST00000364596 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 RNU6-740P-201ENST00000364734 105 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.306-201ENST00000365015 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.312-201ENST00000365089 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.322-201ENST00000365151 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.650-201ENST00000459002 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.49□□□□□ -2.01
VRK1Q99986 SNORA9.3-201ENST00000516383 129 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.777-201ENST00000516982 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 MIR4643-201ENST00000577473 78 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VRK1Q99986 ELOCP29-201ENST00000588193 334 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.771-201ENST00000598668 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 AL353149.1-201ENST00000610667 244 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 Y_RNA.789-201ENST00000622480 102 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VRK1Q99986 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK1Q99986 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
VRK1Q99986 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms