Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MIR5195-201ENST00000583555 115 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 POLR3GP1-201ENST00000594073 261 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF2Q99805 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF2Q99805 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF2Q99805 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF2Q99805 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
TM9SF2Q99805 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF2Q99805 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 Y_RNA.75-201ENST00000362927 97 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 RNU6-312P-201ENST00000364629 107 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 Y_RNA.357-201ENST00000365487 109 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 Y_RNA.398-201ENST00000383952 99 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 MIR627-201ENST00000384979 97 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 MIR23A-201ENST00000385245 73 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 MIR887-201ENST00000401258 79 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 SEPT7P4-201ENST00000437076 306 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 AL392103.1-201ENST00000447000 198 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 AC245047.8-201ENST00000456455 284 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF2Q99805 RNU6-789P-201ENST00000517105 102 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF2Q99805 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
TM9SF2Q99805 MIR4744-201ENST00000581563 82 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 MIR4438-201ENST00000585271 93 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 AP003357.1-201ENST00000604497 148 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 CENPCP1-201ENST00000533085 2578 ntBASIC3.08□□□□□ -1.92
TM9SF2Q99805 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF2Q99805 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF2Q99805 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TM9SF2Q99805 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TM9SF2Q99805 Y_RNA.23-201ENST00000362496 106 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 Y_RNA.272-201ENST00000364696 102 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 SNORA25B-201ENST00000365507 128 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 Y_RNA.441-201ENST00000384123 112 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 RNU6-136P-201ENST00000384663 107 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 SNORA26.7-201ENST00000391288 122 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 RNU6-383P-201ENST00000410864 94 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 AL135786.1-201ENST00000415892 214 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 AC018868.1-201ENST00000491307 315 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 RPL23AP54-201ENST00000495129 419 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 RNU7-116P-201ENST00000516940 62 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 RNU6-856P-201ENST00000516959 98 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 AC108706.1-201ENST00000611053 297 ntBASIC3.07□□□□□ -1.92
TM9SF2Q99805 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TM9SF2Q99805 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNU6-275P-201ENST00000364910 107 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNU6-1323P-201ENST00000384025 107 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 MIR491-201ENST00000384877 84 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNU6-578P-201ENST00000390980 103 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNA5SP511-201ENST00000410487 115 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNA5SP120-201ENST00000410900 112 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 AC244505.4-201ENST00000434905 287 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 HMGN2P34-201ENST00000437647 269 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 SSXP5-201ENST00000443473 287 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 RPL36AP21-201ENST00000490372 323 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNU7-200P-201ENST00000516105 62 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 RNU6-453P-201ENST00000516819 85 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 IGKV2-26-201ENST00000518305 343 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 AC127455.1-201ENST00000565496 145 ntBASIC3.06□□□□□ -1.92
TM9SF2Q99805 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF2Q99805 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF2Q99805 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF2Q99805 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF2Q99805 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF2Q99805 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
TM9SF2Q99805 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF2Q99805 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF2Q99805 SNORD116-18-201ENST00000383961 92 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 MIR483-201ENST00000385070 76 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 AC009238.1-201ENST00000442165 424 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 AC009237.6-201ENST00000446969 424 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 AP001486.1-201ENST00000463339 476 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 RNU6-346P-201ENST00000516288 111 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
TM9SF2Q99805 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TM9SF2Q99805 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.04□□□□□ -1.92
TM9SF2Q99805 MIR340-201ENST00000362125 95 ntBASIC3.04□□□□□ -1.92
TM9SF2Q99805 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
TM9SF2Q99805 Y_RNA.229-201ENST00000364347 113 ntBASIC3.04□□□□□ -1.92
TM9SF2Q99805 SNORA9-201ENST00000384215 133 ntBASIC3.04□□□□□ -1.92
TM9SF2Q99805 MIR616-201ENST00000385293 97 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms