Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC00477Q96M19 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC00477Q96M19 MTND5P35-201ENST00000557537 1720 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 U8.1-201ENST00000362843 134 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNU6-454P-201ENST00000364292 107 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 Y_RNA.315-201ENST00000365117 102 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 Y_RNA.419-201ENST00000384041 102 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNU6-541P-201ENST00000384709 110 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 SNORA67.6-201ENST00000391093 99 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNY4P36-201ENST00000391116 96 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 ATP5J2P3-201ENST00000451550 258 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 SNORD13-201ENST00000459299 104 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNU7-169P-201ENST00000459456 61 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RPL17P19-201ENST00000489069 552 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC099513.1-201ENST00000490423 301 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 FGF7P4-201ENST00000509595 295 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC093303.1-201ENST00000514549 295 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNU6-1114P-201ENST00000516022 107 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 RNU6-699P-201ENST00000517081 110 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC027419.1-201ENST00000522976 328 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 AL160236.1-201ENST00000556317 195 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 SUB1P3-201ENST00000564581 315 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 MIR4795-201ENST00000584182 89 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 MIR4753-201ENST00000585119 83 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC100812.1-201ENST00000607622 580 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 SNORD11B-201ENST00000607707 90 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC00477Q96M19 AC245060.5-201ENST00000610778 3293 ntBASIC1.1□□□□□ -2.23
LINC00477Q96M19 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
LINC00477Q96M19 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU6-1301P-201ENST00000362724 104 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.80-201ENST00000362996 102 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU4-73P-201ENST00000363164 141 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.132-201ENST00000363421 102 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU6-961P-201ENST00000363893 105 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU1-96P-201ENST00000364163 162 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNA5SP190-201ENST00000365222 118 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.364-201ENST00000365532 101 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU6-793P-201ENST00000384233 104 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU6-1145P-201ENST00000384246 107 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.485-201ENST00000384395 102 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC00477Q96M19 SNRPGP13-201ENST00000442212 177 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 MTND5P20-201ENST00000448677 143 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RPS27P1-201ENST00000450552 247 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 ELOCP24-201ENST00000456370 334 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC025465.3-201ENST00000510570 311 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 RNU6-470P-201ENST00000515954 104 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.702-201ENST00000516843 96 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 Y_RNA.706-201ENST00000516933 99 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 SNORA31.24-201ENST00000517232 57 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC084364.2-201ENST00000546924 395 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC005786.1-201ENST00000588553 154 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AL117336.2-201ENST00000602435 335 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 SNRPGP20-201ENST00000604477 205 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC010999.1-201ENST00000611856 324 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AC011476.5-201ENST00000615594 130 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 PISRT1.1-201ENST00000616930 107 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 AL078596.1-201ENST00000624856 447 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.09□□□□□ -2.23
LINC00477Q96M19 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LINC00477Q96M19 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC00477Q96M19 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU1-62P-201ENST00000362599 164 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 Y_RNA.179-201ENST00000363844 90 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 Y_RNA.259-201ENST00000364619 101 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 Y_RNA.263-201ENST00000364659 114 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-245P-201ENST00000384020 107 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-203P-201ENST00000384038 104 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-1235P-201ENST00000384559 107 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 MIR300-201ENST00000401138 83 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 MTCYBP4-201ENST00000401524 249 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 AL355796.1-201ENST00000406706 323 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 MIR1261-201ENST00000408659 82 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 MIR1185-2-201ENST00000408687 86 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-1156P-201ENST00000410365 100 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 RPL23AP50-201ENST00000434149 455 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 HSPE1P9-201ENST00000440046 311 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 snoU13.9-201ENST00000458927 103 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-498P-201ENST00000459468 107 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-221P-201ENST00000459541 99 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 SNORD19B-201ENST00000459623 84 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNA5SP54-201ENST00000516951 92 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 RNU6-902P-201ENST00000517212 91 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 DNAJC19P9-201ENST00000555084 351 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms