Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RNU6-454P-201ENST00000364292 107 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 SNORA68.1-201ENST00000364537 132 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RNY4P28-201ENST00000365281 93 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RNU6-651P-201ENST00000411040 105 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RPL23AP36-201ENST00000413895 458 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RPL23AP58-201ENST00000440453 469 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AC004386.2-201ENST00000441858 148 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AC009237.7-201ENST00000447357 229 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 MRPS10P1-201ENST00000448483 130 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 RNU2-12P-201ENST00000517216 168 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 SNORA81.3-201ENST00000517283 198 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 CBX3P4-201ENST00000538909 354 ntBASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
PHACTR3Q96KR7 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 MIR320B2-201ENST00000408479 138 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 RNU2-54P-201ENST00000410299 190 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC027124.2-201ENST00000428249 105 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 COX6CP14-201ENST00000469580 174 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC091959.1-201ENST00000495857 238 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 SNORA27.4-201ENST00000516650 95 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 MIR4765-201ENST00000585007 77 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC008873.1-201ENST00000625051 138 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 MIR3674-201ENST00000636576 68 ntBASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PHACTR3Q96KR7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.84□□□□□ -1.96
PHACTR3Q96KR7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PHACTR3Q96KR7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 RNU6-727P-201ENST00000363592 107 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 Y_RNA.297-201ENST00000364950 91 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 SNORA18.2-201ENST00000383865 132 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 RNU6-209P-201ENST00000384118 107 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 RNU4-70P-201ENST00000384579 139 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 Y_RNA.555-201ENST00000384673 110 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 MIR1298-201ENST00000408783 112 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 snoU13.26-201ENST00000459452 105 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 RPL21P9-201ENST00000556149 474 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 MIR5002-201ENST00000584713 97 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 AL162424.1-201ENST00000602325 221 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 SNORD11B-201ENST00000607707 90 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 AC004792.1-201ENST00000614523 137 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 AC068205.3-201ENST00000636385 468 ntBASIC2.83□□□□□ -1.96
PHACTR3Q96KR7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 SNORA12-201ENST00000391162 147 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 MIR1289-2-201ENST00000408360 111 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 SNORA11.4-201ENST00000408823 129 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 UBL5P3-201ENST00000475112 231 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 SNORD116-28-201ENST00000516123 91 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 RNU6-826P-201ENST00000516827 104 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 IGKV3-31-201ENST00000523109 329 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 AC103810.1-201ENST00000579873 453 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 RPL17P51-201ENST00000605218 238 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 AC010329.5-201ENST00000623497 2174 ntBASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
PHACTR3Q96KR7 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 PCNPP3-201ENST00000393579 471 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 POLR2KP2-201ENST00000438155 177 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RNA5SP112-201ENST00000515937 99 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RNU2-44P-201ENST00000516795 194 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RNU6-182P-201ENST00000516970 105 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RPL30P11-203ENST00000598995 310 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 AC006001.4-201ENST00000622243 395 ntBASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHACTR3Q96KR7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms