Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MTCO1P44-201ENST00000441935 243 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 AL135938.1-201ENST00000443141 297 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 RPS26P55-201ENST00000471178 356 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 MIR5692C2-201ENST00000577959 77 ntBASIC3.13□□□□□ -1.91
SHDQ96IW2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SHDQ96IW2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
SHDQ96IW2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.12□□□□□ -1.91
SHDQ96IW2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHDQ96IW2 Y_RNA.308-201ENST00000365043 101 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 Y_RNA.310-201ENST00000365063 113 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.12□□□□□ -1.91
SHDQ96IW2 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.12□□□□□ -1.91
SHDQ96IW2 RNA5SP20-201ENST00000515976 84 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 RNU6-1146P-201ENST00000516282 102 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.12□□□□□ -1.91
SHDQ96IW2 AC013791.1-201ENST00000616619 62 ntBASIC3.12□□□□□ -1.91
SHDQ96IW2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SHDQ96IW2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.11□□□□□ -1.91
SHDQ96IW2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHDQ96IW2 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 Y_RNA.124-201ENST00000363339 93 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 MTCO2P33-201ENST00000402100 465 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 RNA5SP508-201ENST00000411327 119 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
SHDQ96IW2 AC018868.1-201ENST00000491307 315 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 RNU6-856P-201ENST00000516959 98 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 AC027419.1-201ENST00000522976 328 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
SHDQ96IW2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.11□□□□□ -1.91
SHDQ96IW2 CENPCP1-201ENST00000533085 2578 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHDQ96IW2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 RNU6-923P-201ENST00000364753 107 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 EDDM3CP-201ENST00000415977 425 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 AC104332.1-201ENST00000440471 797 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 UBBP3-201ENST00000445497 241 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 U8.19-201ENST00000459095 133 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 RPS27P22-201ENST00000478056 241 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 RNU6-1337P-201ENST00000516525 95 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHDQ96IW2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.1□□□□□ -1.91
SHDQ96IW2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHDQ96IW2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHDQ96IW2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHDQ96IW2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHDQ96IW2 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.91
SHDQ96IW2 AC062016.1-201ENST00000355719 319 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 Y_RNA.293-201ENST00000364908 93 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 SNORA26.5-201ENST00000391215 123 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 AL355497.1-201ENST00000406262 551 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 CR769767.1-201ENST00000436337 346 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 AL135790.2-201ENST00000437701 267 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.09□□□□□ -1.91
SHDQ96IW2 AC245102.2-201ENST00000448956 180 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 RPS20P10-201ENST00000451209 253 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 AC010409.1-201ENST00000487382 476 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.09□□□□□ -1.91
SHDQ96IW2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
SHDQ96IW2 AL137100.2-201ENST00000555786 315 ntBASIC3.09□□□□□ -1.91
SHDQ96IW2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHDQ96IW2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SHDQ96IW2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
SHDQ96IW2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.08□□□□□ -1.92
SHDQ96IW2 Y_RNA.150-201ENST00000363562 102 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 Y_RNA.180-201ENST00000363867 113 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 SNORD56.5-201ENST00000364281 72 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 RNU6-493P-201ENST00000391321 108 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 AC016909.1-201ENST00000415916 166 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 RPL36AP21-201ENST00000490372 323 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 AC107393.1-201ENST00000512403 346 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
SHDQ96IW2 AC026271.5-201ENST00000577873 130 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 AC068647.2-201ENST00000637380 353 ntBASIC3.08□□□□□ -1.92
SHDQ96IW2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
SHDQ96IW2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHDQ96IW2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHDQ96IW2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHDQ96IW2 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
SHDQ96IW2 RNA5SP432-201ENST00000362480 116 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 RNU6-653P-201ENST00000363074 106 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 RNU6-1205P-201ENST00000363625 106 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 RNU4-17P-201ENST00000365598 141 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 Y_RNA.435-201ENST00000384095 112 ntBASIC3.07□□□□□ -1.92
SHDQ96IW2 COX6CP10-201ENST00000416832 224 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms