Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC010531.2-201ENST00000465012 153 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 RPS29P21-201ENST00000496272 170 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 AC074133.1-201ENST00000515696 183 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 RNU6-107P-201ENST00000516643 102 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 RNA5SP137-201ENST00000516833 135 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 Y_RNA.721-201ENST00000517207 102 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 AK6P2-201ENST00000549020 471 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 MIR4659A-201ENST00000580269 81 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 AC006504.6-201ENST00000590142 199 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLC47A1Q96FL8 RNU6-418P-201ENST00000384035 107 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.455-201ENST00000384230 98 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 RNU6-975P-201ENST00000384296 105 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 ELOCP21-201ENST00000412558 336 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AC016717.1-201ENST00000448918 286 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 NDUFB4P10-201ENST00000452541 359 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 RNU6-1137P-201ENST00000517073 99 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AC018448.1-201ENST00000552843 316 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AL121655.1-201ENST00000605811 308 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 AC240442.1-201ENST00000616055 283 ntBASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SLC47A1Q96FL8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 MIR340-201ENST00000362125 95 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RNU6-160P-201ENST00000384591 107 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 MIR548B-201ENST00000385247 97 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 MRPL35P1-201ENST00000404272 572 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RPEP5-201ENST00000441137 268 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 AL357134.1-201ENST00000445848 426 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RNU7-57P-201ENST00000459540 60 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RPL26P26-201ENST00000480251 434 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 AC067942.3-201ENST00000512025 362 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RNU6-408P-201ENST00000515910 100 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.715-201ENST00000517082 110 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.89□□□□□ -2.11
SLC47A1Q96FL8 RNU6-961P-201ENST00000363893 105 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 SNORA63.7-201ENST00000365579 123 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU6-1160P-201ENST00000384546 104 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 MIR606-201ENST00000384851 96 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU6-57P-201ENST00000411348 103 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 TOMM22P2-201ENST00000430735 237 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 MTCO1P44-201ENST00000441935 243 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU6-948P-201ENST00000516374 107 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 SCARNA15.1-201ENST00000516384 125 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU6-764P-201ENST00000516396 105 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 RNU2-34P-201ENST00000516534 121 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 AC087441.2-201ENST00000529141 262 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 AC113195.1-201ENST00000579952 141 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 MIR4524B-201ENST00000581569 115 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.772-201ENST00000606692 102 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 AC130454.1-201ENST00000622948 401 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 snoZ196.1-201ENST00000625269 89 ntBASIC1.88□□□□□ -2.11
SLC47A1Q96FL8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 RNA5SP432-201ENST00000362480 116 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 Y_RNA.551-201ENST00000384661 102 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 MIR1252-201ENST00000408861 65 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 RNU6-985P-201ENST00000410182 104 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 AC113618.1-201ENST00000416747 285 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 U8.20-201ENST00000459445 131 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 RNU6-498P-201ENST00000459468 107 ntBASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC47A1Q96FL8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms