Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 U6.115-201ENST00000636045 103 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PTCD3Q96EY7 AC068700.1-201ENST00000565862 3754 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 MIR128-1-201ENST00000384921 82 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 RNU6-763P-201ENST00000390865 106 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 FO393413.1-201ENST00000402892 195 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 SEM1P1-201ENST00000506694 209 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 HMGB3P3-201ENST00000510526 400 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
PTCD3Q96EY7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PTCD3Q96EY7 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNU6-746P-201ENST00000384112 109 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 SNORA48.2-201ENST00000390926 124 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 MIR1185-2-201ENST00000408687 86 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 ATP5EP1-201ENST00000510257 156 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
PTCD3Q96EY7 MIR5692C2-201ENST00000577959 77 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 U6.106-201ENST00000636360 105 ntBASIC2.61□□□□□ -1.99
PTCD3Q96EY7 AC007336.1-201ENST00000576365 3828 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.240-201ENST00000364469 95 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.262-201ENST00000364641 102 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PTCD3Q96EY7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PTCD3Q96EY7 SNORA26.5-201ENST00000391215 123 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCD3Q96EY7 AC090515.1-201ENST00000465295 476 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 SUMO2P18-201ENST00000518873 252 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 AC136628.3-201ENST00000521868 290 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCD3Q96EY7 AP005660.1-201ENST00000522972 293 ntBASIC2.6□□□□□ -1.99
PTCD3Q96EY7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.59□□□□□ -1.99
PTCD3Q96EY7 SNORA68.1-201ENST00000364537 132 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 MIR9-1-201ENST00000385198 89 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 MIR1294-201ENST00000408503 142 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.59□□□□□ -1.99
PTCD3Q96EY7 RNU7-14P-201ENST00000459331 62 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 RNU6-1219P-201ENST00000516143 112 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.59□□□□□ -1.99
PTCD3Q96EY7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AL078604.3-201ENST00000615580 211 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 AC021753.1-201ENST00000635724 168 ntBASIC2.59□□□□□ -1.99
PTCD3Q96EY7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
PTCD3Q96EY7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.58□□□□□ -2
PTCD3Q96EY7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 RNU6-187P-201ENST00000384139 106 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 RNU6-125P-201ENST00000384505 107 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AL357139.1-201ENST00000407792 426 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AC105272.1-201ENST00000438604 198 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AL392103.1-201ENST00000447000 198 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.58□□□□□ -2
PTCD3Q96EY7 Y_RNA.662-201ENST00000516028 97 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 RNU6-406P-201ENST00000516470 107 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 SCARNA3-201ENST00000517097 143 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 RNU6-586P-201ENST00000517265 104 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.58□□□□□ -2
PTCD3Q96EY7 AC018630.3-201ENST00000542637 96 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 MIR3133-201ENST00000583157 78 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.58□□□□□ -2
PTCD3Q96EY7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
PTCD3Q96EY7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 324.7 ms