Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC018448.1-201ENST00000552843 316 ntBASIC1.98□□□□□ -2.09
SMARCE1Q969G3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.98□□□□□ -2.09
SMARCE1Q969G3 AL442163.3-201ENST00000554110 156 ntBASIC1.98□□□□□ -2.09
SMARCE1Q969G3 AC091544.4-201ENST00000555268 342 ntBASIC1.98□□□□□ -2.09
SMARCE1Q969G3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.98□□□□□ -2.09
SMARCE1Q969G3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
SMARCE1Q969G3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.98□□□□□ -2.09
SMARCE1Q969G3 RNU1-96P-201ENST00000364163 162 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.97□□□□□ -2.09
SMARCE1Q969G3 RNU6-926P-201ENST00000384075 107 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 Y_RNA.535-201ENST00000384612 99 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC018865.2-201ENST00000423631 129 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 RNA5SP57-201ENST00000459463 123 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC074133.1-201ENST00000515696 183 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 RNU6-976P-201ENST00000516086 111 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 RNU4-77P-201ENST00000516692 156 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 CYCSP23-201ENST00000519781 313 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC110588.1-201ENST00000559699 137 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC006600.1-201ENST00000572529 153 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 AC092447.9-201ENST00000603395 144 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 MTND4P29-201ENST00000503122 1372 ntBASIC1.97□□□□□ -2.09
SMARCE1Q969G3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 RNA5SP363-201ENST00000365072 115 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 SNORD42.2-201ENST00000365570 69 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 SNORA70B-201ENST00000384210 135 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AC008134.1-201ENST00000420943 193 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 TOMM22P2-201ENST00000430735 237 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AC245047.4-201ENST00000433189 144 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 RNU6-625P-201ENST00000459412 107 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.96□□□□□ -2.1
SMARCE1Q969G3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.96□□□□□ -2.1
SMARCE1Q969G3 uc_338.22-201ENST00000622722 187 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.96□□□□□ -2.1
SMARCE1Q969G3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMARCE1Q969G3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.95□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNU6-797P-201ENST00000363101 109 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNU6-112P-201ENST00000363599 104 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNU6-961P-201ENST00000363893 105 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.813-201ENST00000364639 102 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 MIR628-201ENST00000385229 95 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNA5SP467-201ENST00000391274 118 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 MIR1253-201ENST00000408273 105 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 AC009310.1-201ENST00000414414 451 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
SMARCE1Q969G3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RPL31P63-201ENST00000422565 375 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RAB28P5-201ENST00000427490 651 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 AL137792.2-201ENST00000443484 235 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNU6-1170P-201ENST00000515974 106 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNA5SP182-201ENST00000516064 82 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 RNU6-911P-201ENST00000516523 104 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 VN1R91P-201ENST00000594377 169 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 SNORD58B-201ENST00000607313 66 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 AC007485.1-201ENST00000616755 206 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 AL160413.1-201ENST00000622780 310 ntBASIC1.95□□□□□ -2.1
SMARCE1Q969G3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCE1Q969G3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SMARCE1Q969G3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RNY1P14-201ENST00000384426 108 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RNU6-308P-201ENST00000390957 107 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 CST2P1-201ENST00000425770 87 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RPL23AP6-201ENST00000446637 472 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.639-201ENST00000458981 102 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RPL26P26-201ENST00000480251 434 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 AC010469.2-201ENST00000496412 480 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.94□□□□□ -2.1
SMARCE1Q969G3 RNU6-408P-201ENST00000515910 100 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 SNORA31.17-201ENST00000516953 127 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 AC010900.2-201ENST00000604508 210 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 AC069114.2-201ENST00000604699 304 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 U6.92-201ENST00000636464 89 ntBASIC1.94□□□□□ -2.1
SMARCE1Q969G3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.31-201ENST00000362574 102 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 RNU6-454P-201ENST00000364292 107 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 RNU1-115P-201ENST00000365329 160 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 RPS20P15-201ENST00000412792 311 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 SNORD65B-201ENST00000459126 73 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms