Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MIR548I1-201ENST00000408810 149 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 AC004386.2-201ENST00000441858 148 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 RPS29P21-201ENST00000496272 170 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 RNU6-496P-201ENST00000516145 99 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 RN7SKP49-201ENST00000516675 260 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 MIR4643-201ENST00000577473 78 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.48□□□□□ -2.01
ATP2A3Q93084 MIR5006-201ENST00000583027 110 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 MIR4769-201ENST00000584126 77 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 AC141273.2-201ENST00000618989 130 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 LINC02555-201ENST00000563933 1951 ntBASIC2.48□□□□□ -2.01
ATP2A3Q93084 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATP2A3Q93084 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 RNU6-338P-201ENST00000383888 105 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 Y_RNA.581-201ENST00000391017 97 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 AL603910.2-201ENST00000407268 136 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 SNORD12B-201ENST00000410433 91 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 RNU2-64P-201ENST00000411315 191 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 snoU13.26-201ENST00000459452 105 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 AC018868.1-201ENST00000491307 315 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 RNU6-138P-201ENST00000515952 107 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 Y_RNA.683-201ENST00000516508 93 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 RNU2-44P-201ENST00000516795 194 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.47□□□□□ -2.01
ATP2A3Q93084 AC018630.3-201ENST00000542637 96 ntBASIC2.47□□□□□ -2.01
ATP2A3Q93084 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.47□□□□□ -2.01
ATP2A3Q93084 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ATP2A3Q93084 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.47□□□□□ -2.01
ATP2A3Q93084 Y_RNA.20-201ENST00000362479 113 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 SNORD113-8-201ENST00000363497 74 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 RNU6-961P-201ENST00000363893 105 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 Y_RNA.416-201ENST00000384014 113 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 MIR329-1-201ENST00000385028 80 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATP2A3Q93084 RNU4-30P-201ENST00000410245 143 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 Y_RNA.595-201ENST00000410403 105 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 AC005002.2-201ENST00000438228 269 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 RPS23P5-201ENST00000495419 428 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 RNU6-966P-201ENST00000516479 104 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 RNU5F-4P-201ENST00000516581 114 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 SCARNA24.2-201ENST00000516968 130 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 CYCSP23-201ENST00000519781 313 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 IGKV3-31-201ENST00000523109 329 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 AC055872.1-201ENST00000570978 278 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 MIR4648-201ENST00000580107 72 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.46□□□□□ -2.02
ATP2A3Q93084 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ATP2A3Q93084 MTND5P35-201ENST00000557537 1720 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
ATP2A3Q93084 AL391987.6-201ENST00000305671 199 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 RNU6-546P-201ENST00000383991 107 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 Y_RNA.462-201ENST00000384268 102 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 RNU2-32P-201ENST00000411193 191 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
ATP2A3Q93084 AC009237.7-201ENST00000447357 229 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 RPL23AP3-201ENST00000453844 468 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 MIR449C-201ENST00000516047 92 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 DEFB131C-201ENST00000528817 165 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.45□□□□□ -2.02
ATP2A3Q93084 AC130289.1-201ENST00000577321 73 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 AL031274.2-201ENST00000599419 203 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 Y_RNA.772-201ENST00000606692 102 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 AP006437.1-201ENST00000641440 3685 ntBASIC2.45□□□□□ -2.02
ATP2A3Q93084 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATP2A3Q93084 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 MIR335-201ENST00000362173 94 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 Y_RNA.274-201ENST00000364714 101 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 Y_RNA.277-201ENST00000364754 102 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 RNU6-1145P-201ENST00000384246 107 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC091179.3-201ENST00000474761 144 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 RNU6-344P-201ENST00000516635 111 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC233702.2-202ENST00000562547 291 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 AC127459.3-201ENST00000624328 466 ntBASIC2.44□□□□□ -2.02
ATP2A3Q93084 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.44□□□□□ -2.02
ATP2A3Q93084 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
ATP2A3Q93084 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms