Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR561-201ENST00000385216 97 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 SNORA11.2-201ENST00000408318 127 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 RNU2-48P-201ENST00000410694 191 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 HMGN2P18-201ENST00000450680 270 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 UBE2DNL-203ENST00000474922 222 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 RNU6-436P-201ENST00000516171 114 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 RNU4-71P-201ENST00000516258 113 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 SNORA27.4-201ENST00000516650 95 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 RPL21P9-201ENST00000556149 474 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 MIR3145-201ENST00000580727 82 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 DEFB117-201ENST00000602356 141 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 AC009779.6-201ENST00000603972 165 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 snoZ196.1-201ENST00000625269 89 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4AQ8WYN0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 Y_RNA.65-201ENST00000362846 100 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 RNU6-324P-201ENST00000363957 106 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 SNORD56.5-201ENST00000364281 72 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 RNU6-740P-201ENST00000364734 105 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AL031003.1-201ENST00000404229 172 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 UBBP3-201ENST00000445497 241 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 MIR4643-201ENST00000577473 78 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 MIR3684-201ENST00000579779 74 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AL512605.2-201ENST00000592972 256 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AL162424.1-201ENST00000602325 221 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 U6.115-201ENST00000636045 103 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
ATG4AQ8WYN0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC062016.1-201ENST00000355719 319 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 RNU6-743P-201ENST00000364151 106 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 SUMO1P2-201ENST00000452524 304 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AL137159.1-201ENST00000452808 512 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC018868.1-201ENST00000491307 315 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 RNU6-191P-201ENST00000516295 94 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 AC005828.6-201ENST00000606610 232 ntBASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
ATG4AQ8WYN0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
ATG4AQ8WYN0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU2-14P-201ENST00000411053 191 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU6-57P-201ENST00000411348 103 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AC024067.1-201ENST00000426199 223 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AC016717.1-201ENST00000448918 286 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU6-498P-201ENST00000459468 107 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU6-221P-201ENST00000459541 99 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RNU2-34P-201ENST00000516534 121 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 U4atac.1-201ENST00000618345 95 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4AQ8WYN0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AC026436.1-201ENST00000510537 270 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RNA5SP356-201ENST00000515972 94 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RNU6-948P-201ENST00000516374 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms