Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC060780.3-201ENST00000589464 80 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AL590240.4-201ENST00000616908 390 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC092794.2-201ENST00000620933 563 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 AC008555.8-201ENST00000623602 2168 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 snoU2-30.2-201ENST00000362805 70 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 SNORA72.1-201ENST00000363485 129 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.166-201ENST00000363730 102 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 SNORD31B-201ENST00000364977 69 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 SNORD81.2-201ENST00000365153 76 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 RNY3P14-201ENST00000384309 102 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 MIR934-201ENST00000401241 83 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1050P-201ENST00000410388 107 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 SDAD1P3-201ENST00000427380 333 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.653-201ENST00000459091 95 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 AC087477.1-201ENST00000465747 340 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 AC018710.1-201ENST00000506509 158 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 PRDX4P1-201ENST00000507189 574 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 RNU6-277P-201ENST00000516272 106 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1198P-201ENST00000516904 67 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 MIR4801-201ENST00000582704 82 ntBASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.160-201ENST00000363677 92 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-968P-201ENST00000384076 107 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1026P-201ENST00000384465 108 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1235P-201ENST00000384559 107 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1093P-201ENST00000391194 107 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-876P-201ENST00000391295 104 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 HMGN2P39-201ENST00000398005 273 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 AC138393.2-201ENST00000414742 246 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1132P-201ENST00000459214 107 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNU6-498P-201ENST00000459468 107 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 RNA5SP330-201ENST00000517096 96 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 MIR4753-201ENST00000585119 83 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 SNRPGP20-201ENST00000604477 205 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 AL022345.1-201ENST00000607292 135 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
SHROOM3Q8TF72 U3.9-201ENST00000363823 204 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 MIR518A2-201ENST00000384966 87 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 AC060773.1-201ENST00000421698 310 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 RPL23AP50-201ENST00000434149 455 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 HMGN2P34-201ENST00000437647 269 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 MTCO3P8-201ENST00000453691 755 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 RNU7-14P-201ENST00000459331 62 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 RPL30P10-201ENST00000488148 337 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 AC063943.3-201ENST00000615562 356 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.25
SHROOM3Q8TF72 ZNF702P-202ENST00000434269 1966 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNA5SP276-201ENST00000362580 94 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNY1P16-201ENST00000363063 111 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.179-201ENST00000363844 90 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.594-201ENST00000410373 140 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 EIF4EP2-201ENST00000422816 654 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 SNRPEP8-201ENST00000442866 260 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 MTND5P5-201ENST00000503764 376 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 AC046134.1-201ENST00000514454 666 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1146P-201ENST00000516282 102 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNA5SP137-201ENST00000516833 135 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1213P-201ENST00000517075 94 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 AC022254.1-201ENST00000567857 235 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 MIR3169-201ENST00000578032 83 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 PISRT1.1-201ENST00000616930 107 ntBASIC1.02□□□□□ -2.25
SHROOM3Q8TF72 RNU6-545P-201ENST00000362681 104 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 SNORD32B-201ENST00000364460 84 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 PDCL2P1-201ENST00000419302 352 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MTCYBP10-201ENST00000424905 650 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AL035666.1-201ENST00000446195 348 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNU6-559P-201ENST00000516151 98 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 SNORA25.14-201ENST00000516481 132 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNU7-193P-201ENST00000516723 65 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC034114.1-201ENST00000520293 285 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AL355375.2-201ENST00000574825 175 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MIR5094-201ENST00000578766 85 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC100830.2-201ENST00000581636 240 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC005899.2-201ENST00000584353 90 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.294-201ENST00000364916 102 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNU6-306P-201ENST00000384617 107 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 SNORA69.1-201ENST00000390904 137 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNU6-370P-201ENST00000411008 104 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 RNU1-98P-201ENST00000458992 160 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms