Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-436P-201ENST00000516171 114 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 AC009127.3-201ENST00000570531 403 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 AC020895.1-201ENST00000595362 272 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 FTX_3.1-201ENST00000610451 147 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 TUG1_4.1-201ENST00000619464 181 ntBASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH3RF3Q8TEJ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 SNORD56.1-201ENST00000362913 68 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 MIR549A-201ENST00000385268 96 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1064P-201ENST00000410626 104 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RN7SKP61-201ENST00000410642 295 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RPS26P42-201ENST00000413485 326 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RPL26P27-201ENST00000414397 437 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 AC074117.2-201ENST00000417130 397 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 AC091179.3-201ENST00000474761 144 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNA5SP320-201ENST00000516263 124 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-453P-201ENST00000516819 85 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.709-201ENST00000516952 92 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 RNU2-12P-201ENST00000517216 168 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 AC109810.1-201ENST00000534066 224 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 HSPE1P4-201ENST00000550617 308 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 MIR4679-2-201ENST00000578358 77 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.1□□□□□ -1.91
SH3RF3Q8TEJ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-103P-201ENST00000363686 107 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-454P-201ENST00000364292 107 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-376P-201ENST00000384731 106 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNU6-460P-201ENST00000391158 108 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC007215.1-201ENST00000464893 276 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 RNA5SP54-201ENST00000516951 92 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 CYCSP23-201ENST00000519781 313 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 CR383656.8-201ENST00000549046 145 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC013412.1-201ENST00000610687 192 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC013791.1-201ENST00000616619 62 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC002064.3-201ENST00000623448 346 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC012640.5-201ENST00000623897 319 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 AC134026.1-201ENST00000623249 2239 ntBASIC3.09□□□□□ -1.91
SH3RF3Q8TEJ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.09□□□□□ -1.92
SH3RF3Q8TEJ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.09□□□□□ -1.92
SH3RF3Q8TEJ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 MTND5P32-201ENST00000560711 1802 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RNU1-100P-201ENST00000365255 165 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-476P-201ENST00000384726 107 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA26.3-201ENST00000391119 136 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 AC096649.2-201ENST00000416186 393 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 AC006026.2-201ENST00000457376 180 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RPL26P9-201ENST00000457466 433 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-589P-201ENST00000516485 107 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA31.23-201ENST00000517219 133 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 AC136628.3-201ENST00000521868 290 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 AP001340.1-201ENST00000624405 217 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 MIR3674-201ENST00000636576 68 ntBASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SH3RF3Q8TEJ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 Y_RNA.251-201ENST00000364551 99 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 Y_RNA.337-201ENST00000365312 102 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 SNORD21-201ENST00000383953 95 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-1144P-201ENST00000384247 104 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 U3.40-201ENST00000408706 208 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC078809.1-201ENST00000427601 140 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 MTATP6P7-201ENST00000453315 681 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 SNRPGP7-201ENST00000469016 106 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC016632.1-201ENST00000503994 196 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 Y_RNA.712-201ENST00000517011 92 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC091544.4-201ENST00000555268 342 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC025281.1-201ENST00000567026 265 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms