Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 Vault.1-201ENST00000516474 102 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-762P-201ENST00000517107 102 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 IGKV1-22-201ENST00000524313 326 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AL022345.2-201ENST00000606307 135 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AL162274.2-201ENST00000614406 332 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AP001318.4-201ENST00000616637 121 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.52-201ENST00000362760 96 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.91-201ENST00000363042 107 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.328-201ENST00000365208 113 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 AL139095.1-201ENST00000404326 391 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 HMGN2P9-201ENST00000476875 229 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 RNA5SP468-201ENST00000516782 93 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 SNORD19.2-201ENST00000516978 73 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 HSPE1P18-201ENST00000517602 280 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 AC073308.1-201ENST00000623696 305 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.43□□□□□ -1.86
SHKBP1Q8TBC3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 AC069528.2-201ENST00000624849 1991 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 AL356292.1-201ENST00000283110 373 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-50P-201ENST00000362356 103 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.634-201ENST00000364811 113 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-1131P-201ENST00000364955 107 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 SNORA51.4-201ENST00000364993 124 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-49P-201ENST00000384256 107 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.558-201ENST00000384685 113 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 SNORA12-201ENST00000391162 147 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 RNU2-70P-201ENST00000410718 179 ntBASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.42□□□□□ -1.86
SHKBP1Q8TBC3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 USP8P1-201ENST00000494673 3183 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 Y_RNA.85-201ENST00000363014 111 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-756P-201ENST00000383997 107 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 MIR891A-201ENST00000401237 79 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 HMGN2P32-201ENST00000444648 269 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 SNORD77.4-201ENST00000516158 81 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 PRELID2P1-201ENST00000552837 301 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 EIF4BP1-201ENST00000554881 351 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 AC009831.4-201ENST00000620744 325 ntBASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHKBP1Q8TBC3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SHKBP1Q8TBC3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHKBP1Q8TBC3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-271P-201ENST00000363858 105 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP129-201ENST00000410276 118 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 RNU1-104P-201ENST00000517280 175 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 RPL17P51-201ENST00000605218 238 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 uc_338.4-201ENST00000616635 176 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 AC026241.1-201ENST00000517873 2142 ntBASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SHKBP1Q8TBC3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 AL596211.1-201ENST00000569873 2277 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 MIR422A-201ENST00000362286 90 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 Y_RNA.163-201ENST00000363702 113 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 MIR624-201ENST00000385217 97 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 SNORD12C-201ENST00000386307 89 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 MIR1263-201ENST00000408324 86 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 AL021397.1-201ENST00000451806 248 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 SNORD65B-201ENST00000459126 73 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-63P-201ENST00000516690 95 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms