Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 AC002546.1-201ENST00000588041 2504 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 Y_RNA.10-201ENST00000362371 110 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 Y_RNA.73-201ENST00000362910 113 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-888P-201ENST00000363010 101 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 MT-TI-201ENST00000387365 69 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 SNORD105B-201ENST00000458770 79 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-221P-201ENST00000459541 99 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-1018P-201ENST00000516577 106 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 AC022254.1-201ENST00000567857 235 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 HSPE1P7-201ENST00000604681 321 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 AL353746.1-201ENST00000566293 6881 ntBASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-3Q8TAU0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-776P-201ENST00000364403 104 ntBASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-1022P-201ENST00000365049 104 ntBASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 MIR300-201ENST00000401138 83 ntBASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 AC012493.2-201ENST00000595083 291 ntBASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NKX2-3Q8TAU0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-1210P-201ENST00000363775 107 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 Y_RNA.313-201ENST00000365095 103 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 SNORD61-201ENST00000384252 73 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 HSPE1P26-201ENST00000405341 275 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 RPL39P25-201ENST00000449384 154 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 AC097462.1-201ENST00000514125 324 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 RN7SKP209-201ENST00000516888 304 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 SNORD19.2-201ENST00000516978 73 ntBASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-3Q8TAU0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 AC058791.1-201ENST00000608412 3198 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 SNORA38.1-201ENST00000364172 131 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 MIR128-1-201ENST00000384921 82 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 SNORD77.3-201ENST00000391113 65 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 HMGN2P16-201ENST00000456802 261 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 AC096725.1-201ENST00000514266 313 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 AF117829.1-206ENST00000621883 3802 ntBASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-3Q8TAU0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 AC093908.1-201ENST00000623125 8092 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-486P-201ENST00000363116 107 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RNU6-1099P-201ENST00000363533 107 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 MIR1283-1-201ENST00000408494 87 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RNU2-37P-201ENST00000410695 177 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 AC115115.1-201ENST00000449927 248 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 SNRPGP5-201ENST00000456003 220 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 RNA5SP57-201ENST00000459463 123 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 AC080013.2-201ENST00000460866 323 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 UBE2DNL-203ENST00000474922 222 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 JPX_2.1-201ENST00000614161 69 ntBASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-3Q8TAU0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 AL035425.3-201ENST00000564206 4996 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 AC009487.4-201ENST00000624969 3585 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 RNU1-133P-201ENST00000364867 167 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 RNA5SP120-201ENST00000410900 112 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 RPS4XP11-201ENST00000446897 772 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 MIR3163-201ENST00000581592 73 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 AC091152.3-201ENST00000604227 325 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 MIR8058-201ENST00000615737 89 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 U6.73-201ENST00000619194 103 ntBASIC4.34□□□□□ -1.71
NKX2-3Q8TAU0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 SNORD9-201ENST00000362566 104 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-655P-201ENST00000362858 107 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 Y_RNA.298-201ENST00000364960 107 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 Y_RNA.437-201ENST00000384113 113 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms