Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 CASC19-280ENST00000642102 1351 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.1-201ENST00000352915 104 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.796-201ENST00000364268 102 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.799-201ENST00000364992 102 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.381-201ENST00000365666 102 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RNU6-38P-201ENST00000384085 107 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RNU6-424P-201ENST00000384367 105 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 MIR153-2-201ENST00000385225 87 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AL590002.1-201ENST00000406554 418 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AL445305.1-201ENST00000432577 575 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 FABP5P4-201ENST00000437203 171 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RPEP5-201ENST00000441137 268 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 TPT1P7-201ENST00000458300 517 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 LINC01399-202ENST00000458450 244 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RPS27P22-201ENST00000478056 241 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RPS26P48-201ENST00000491713 339 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RNU6-1332P-201ENST00000516666 104 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RNU2-56P-201ENST00000516826 190 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 RNU6-58P-201ENST00000517143 103 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AP003484.1-201ENST00000530974 250 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AL133215.3-201ENST00000609801 448 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AC104465.1-201ENST00000611365 139 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 AC006504.8-201ENST00000621046 635 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 Z69908.1-201ENST00000622603 247 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 MIR6079-201ENST00000635807 62 ntBASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNU6-137P-201ENST00000363680 108 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNU6-280P-201ENST00000364145 104 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.296-201ENST00000364930 108 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNU4-20P-201ENST00000365601 151 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 SNORD116-13-201ENST00000384408 92 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNU6-110P-201ENST00000384508 104 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RPS26P5-201ENST00000418544 335 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 CALM2P4-201ENST00000430810 426 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RNU6-1208P-201ENST00000459588 107 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 RPS3AP17-201ENST00000472594 777 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 MTND3P7-201ENST00000474435 343 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 SNORA70.12-201ENST00000516084 153 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AP002001.1-203ENST00000534002 267 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC026371.1-201ENST00000551867 419 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 MTND1P15-201ENST00000579262 949 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AL512605.2-201ENST00000592972 256 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC092807.2-201ENST00000609367 243 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC073534.2-201ENST00000620377 381 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 AC068137.4-201ENST00000638485 296 ntBASIC0.5□□□□□ -2.33
ZIC4Q8N9L1 MTND4P12-201ENST00000498999 1377 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RNU6-727P-201ENST00000363592 107 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RNU6-873P-201ENST00000363833 107 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.415-201ENST00000384012 112 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RNU6-790P-201ENST00000384479 105 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RNU6-541P-201ENST00000384709 110 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 MIR605-201ENST00000385078 83 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 U8.16-201ENST00000391279 133 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 MTCO1P20-201ENST00000425366 358 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RNU7-12P-201ENST00000516030 62 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 RPL21P9-201ENST00000556149 474 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AL353765.1-201ENST00000605514 183 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AC087752.4-201ENST00000605911 462 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AC012557.2-201ENST00000605919 418 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 FAM157A-202ENST00000615155 405 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
ZIC4Q8N9L1 SNORD50.1-201ENST00000362987 71 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.184-201ENST00000363884 108 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 RNU4-12P-201ENST00000365233 139 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 SNORA75-201ENST00000384158 137 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 RNU6-793P-201ENST00000384233 104 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 USP9YP29-201ENST00000445112 563 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AC079354.2-201ENST00000453523 154 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AC245047.8-201ENST00000456455 284 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 SNORD65B-201ENST00000459126 73 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 RNU6-261P-201ENST00000459506 102 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AL049830.1-201ENST00000468034 425 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 COX6CP6-201ENST00000490840 228 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AC010469.2-201ENST00000496412 480 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AC023157.2-201ENST00000540596 141 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 MTATP6P24-201ENST00000576835 677 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AL158063.1-201ENST00000615349 536 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 RMST_2.1-201ENST00000617263 136 ntBASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ZIC4Q8N9L1 AC121333.1-201ENST00000567488 2709 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms