Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MCFD2P1-201ENST00000417812 300 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 USP9YP16-201ENST00000430287 407 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MTND4P19-201ENST00000446659 478 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 AC009237.7-201ENST00000447357 229 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 USP9YP23-201ENST00000455085 407 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 HMGN2P23-201ENST00000456759 269 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 U8.22-201ENST00000459141 133 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 RNU4-77P-201ENST00000516692 156 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 SNORA31.17-201ENST00000516953 127 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RTL3Q8N8U3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RTL3Q8N8U3 UBL5P4-201ENST00000562584 236 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 AC125232.2-201ENST00000592457 143 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 SNRPGP20-201ENST00000604477 205 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MIR8081-201ENST00000611533 95 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 AC083806.3-201ENST00000614016 455 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
RTL3Q8N8U3 MIR4272-201ENST00000635924 64 ntBASIC1.74□□□□□ -2.13
RTL3Q8N8U3 ZNF204P-201ENST00000416749 2397 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 RNU6-873P-201ENST00000363833 107 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 RNU6-280P-201ENST00000364145 104 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 SNORA18.2-201ENST00000383865 132 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 SNORA69.1-201ENST00000390904 137 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AC005534.2-201ENST00000431047 433 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 MTCO3P8-201ENST00000453691 755 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AC016925.1-201ENST00000458303 298 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AC010409.1-201ENST00000487382 476 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 RNU6-344P-201ENST00000516635 111 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 RN7SKP295-201ENST00000517264 153 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AC144568.1-201ENST00000520139 137 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 MIR3683-201ENST00000580847 82 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 MIR3171-201ENST00000584270 74 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 SNORD58B-201ENST00000607313 66 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 AL159152.1-201ENST00000635019 2587 ntBASIC1.73□□□□□ -2.13
RTL3Q8N8U3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
RTL3Q8N8U3 RNU1-62P-201ENST00000362599 164 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 Y_RNA.358-201ENST00000365491 99 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 SNORA67.2-201ENST00000384300 149 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 RNU6-541P-201ENST00000384709 110 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 MIR549A-201ENST00000385268 96 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AL163540.1-201ENST00000485382 386 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
RTL3Q8N8U3 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AC092447.9-201ENST00000603395 144 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AC008873.1-201ENST00000625051 138 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AL606534.2-204ENST00000635008 178 ntBASIC1.72□□□□□ -2.13
RTL3Q8N8U3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RTL3Q8N8U3 MIR340-201ENST00000362125 95 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 MIR424-201ENST00000362227 98 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 SNORA22B-201ENST00000383876 138 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNU6-1145P-201ENST00000384246 107 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNU6-318P-201ENST00000384283 103 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNY3P4-201ENST00000384428 101 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 MIR329-1-201ENST00000385028 80 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNU6-308P-201ENST00000390957 107 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 RNA5SP504-201ENST00000410676 117 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 AC004386.2-201ENST00000441858 148 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 AC025465.3-201ENST00000510570 311 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 SNORA40.14-201ENST00000516543 86 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 AL442163.3-201ENST00000554110 156 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 VN1R91P-201ENST00000594377 169 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 AC007485.1-201ENST00000616755 206 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 AL138825.1-201ENST00000618587 192 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 U2.1-201ENST00000618978 145 ntBASIC1.71□□□□□ -2.14
RTL3Q8N8U3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.7□□□□□ -2.14
RTL3Q8N8U3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RTL3Q8N8U3 MIR126-201ENST00000362291 85 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 RNY3P11-201ENST00000364153 102 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 MIR764-201ENST00000390811 85 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 MIR320B2-201ENST00000408479 138 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
RTL3Q8N8U3 AC114482.1-201ENST00000418010 247 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 EBAG9P1-201ENST00000418955 543 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 AC091179.3-201ENST00000474761 144 ntBASIC1.7□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms