Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-180P-201ENST00000516697 61 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 RNU7-28P-201ENST00000516759 62 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 AC023442.1-201ENST00000531247 422 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 AC009994.1-201ENST00000606889 253 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AL049829.1-201ENST00000465411 156 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC010424.1-201ENST00000506336 297 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNU7-41P-201ENST00000515917 61 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNU7-99P-201ENST00000516271 62 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 DEFB130C-202ENST00000530001 230 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC121334.2-201ENST00000605387 271 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC013244.3-201ENST00000605614 388 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC104260.1-201ENST00000616660 539 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 SNORD115-2-201ENST00000362842 82 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNA5SP205-201ENST00000364653 136 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 MIR526A1-201ENST00000384897 85 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNA5SP95-201ENST00000410319 137 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC008134.1-201ENST00000420943 193 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 MTCO2P23-201ENST00000425216 680 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC079354.2-201ENST00000453523 154 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 U4.7-201ENST00000638126 106 ntBASIC-1.23□□□□□ -2.61
VPS8Q8N3P4 RNU6-552P-201ENST00000362869 119 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 RNU6-161P-201ENST00000363051 106 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 RNA5SP48-201ENST00000363969 126 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 ZNF885P-201ENST00000420174 1098 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 AL590491.3-201ENST00000610731 82 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.24□□□□□ -2.61
VPS8Q8N3P4 SNORA26.3-201ENST00000391119 136 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 MTCO1P17-201ENST00000411522 491 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 RNU7-57P-201ENST00000459540 60 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 RNU6-274P-201ENST00000459566 107 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 RPS29P27-201ENST00000463711 170 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 DEFB131E-202ENST00000602581 683 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 AC068790.2-201ENST00000602601 557 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 AL359547.2-201ENST00000615810 418 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 MIR6828-201ENST00000636181 60 ntBASIC-1.25□□□□□ -2.61
VPS8Q8N3P4 RNU6-946P-201ENST00000383878 107 ntBASIC-1.26□□□□□ -2.61
VPS8Q8N3P4 RPL23AP30-201ENST00000432419 501 ntBASIC-1.26□□□□□ -2.61
VPS8Q8N3P4 AC090572.1-201ENST00000519251 160 ntBASIC-1.26□□□□□ -2.61
VPS8Q8N3P4 AP003168.1-201ENST00000530091 307 ntBASIC-1.26□□□□□ -2.61
VPS8Q8N3P4 AC005520.5-201ENST00000613926 164 ntBASIC-1.26□□□□□ -2.61
VPS8Q8N3P4 MIR365A-201ENST00000362260 87 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 SNORA36.1-201ENST00000363424 132 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 MIR891A-201ENST00000401237 79 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 AL590623.1-201ENST00000427864 105 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 AL392103.1-201ENST00000447000 198 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 RNU6-377P-201ENST00000515965 102 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 AC138869.1-201ENST00000568623 124 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 MIR3146-201ENST00000580367 79 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 AC012433.1-201ENST00000588916 398 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 AC091304.9-201ENST00000612091 226 ntBASIC-1.27□□□□□ -2.61
VPS8Q8N3P4 RNU6-613P-201ENST00000410412 108 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 USP9YP21-201ENST00000420603 432 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 RPL39P34-201ENST00000477141 156 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 RNU2-60P-201ENST00000517290 128 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 AP001372.4-201ENST00000524889 472 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 MIR4499-201ENST00000584834 69 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 AL136221.1-201ENST00000621449 509 ntBASIC-1.28□□□□□ -2.61
VPS8Q8N3P4 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.29□□□□□ -2.62
VPS8Q8N3P4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.29□□□□□ -2.62
VPS8Q8N3P4 MIR1185-2-201ENST00000408687 86 ntBASIC-1.29□□□□□ -2.62
VPS8Q8N3P4 AC023050.3-201ENST00000541142 333 ntBASIC-1.29□□□□□ -2.62
VPS8Q8N3P4 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 RNU6-692P-201ENST00000384496 107 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 MIR1298-201ENST00000408783 112 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 RPS24P1-201ENST00000438550 371 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 AC108729.2-201ENST00000476543 840 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 AC010486.2-201ENST00000505572 483 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 MIR2115-201ENST00000516657 100 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 RNU6-158P-201ENST00000517104 100 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 AC025647.1-201ENST00000517879 253 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 MIR4771-2-201ENST00000577758 74 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 AC100830.2-201ENST00000581636 240 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 MIR4771-1-201ENST00000582617 74 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 AC010999.1-201ENST00000611856 324 ntBASIC-1.3□□□□□ -2.62
VPS8Q8N3P4 U3.4-201ENST00000363352 213 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 SNORD114-3-201ENST00000364969 75 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 AL500527.2-201ENST00000454105 95 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 RNU2-56P-201ENST00000516826 190 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 MIR5006-201ENST00000583027 110 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 AC063944.3-201ENST00000609969 533 ntBASIC-1.31□□□□□ -2.62
VPS8Q8N3P4 uc_338.19-201ENST00000616808 99 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 291.5 ms