Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR17-201ENST00000385012 84 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 U3.40-201ENST00000408706 208 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 RNU6-130P-201ENST00000411112 103 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS52Q8N1B4 SNORA4.4-201ENST00000515921 135 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 RNU6-548P-201ENST00000517083 115 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AC018448.1-201ENST00000552843 316 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AL353997.5-201ENST00000618886 171 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AL078596.1-201ENST00000624856 447 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNU6-438P-201ENST00000365561 103 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNU6-975P-201ENST00000384296 105 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 MIR548B-201ENST00000385247 97 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 AL356379.1-201ENST00000414105 126 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS52Q8N1B4 MTND2P23-201ENST00000422990 651 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 MTCO1P44-201ENST00000441935 243 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 AC114982.1-201ENST00000469402 321 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNU6-327P-201ENST00000516270 127 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS52Q8N1B4 RAC1P9-201ENST00000604990 392 ntBASIC2.29□□□□□ -2.04
VPS52Q8N1B4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNU6-961P-201ENST00000363893 105 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNU6-926P-201ENST00000384075 107 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 MIR548F4-201ENST00000408515 105 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 TOMM22P2-201ENST00000430735 237 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AL603825.1-201ENST00000438481 80 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 MTND5P22-201ENST00000458380 195 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNU6-625P-201ENST00000459412 107 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC010531.2-201ENST00000465012 153 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC010655.3-201ENST00000478818 450 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNU6-1045P-201ENST00000516321 107 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC026271.5-201ENST00000577873 130 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 MIR4423-201ENST00000580922 80 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 AC011476.5-201ENST00000615594 130 ntBASIC2.28□□□□□ -2.04
VPS52Q8N1B4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS52Q8N1B4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS52Q8N1B4 RAB28P5-201ENST00000427490 651 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 AL357134.1-201ENST00000445848 426 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 RNU6-408P-201ENST00000515910 100 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 RNU7-193P-201ENST00000516723 65 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS52Q8N1B4 AC008737.2-201ENST00000599446 118 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 AC136443.5-201ENST00000603741 370 ntBASIC2.27□□□□□ -2.05
VPS52Q8N1B4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 SNORD14D-201ENST00000384390 87 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 MIR1185-2-201ENST00000408687 86 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 AC074290.1-201ENST00000448883 135 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS52Q8N1B4 RNU6-498P-201ENST00000459468 107 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 RNU7-57P-201ENST00000459540 60 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 RNU6-948P-201ENST00000516374 107 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 RNU6-295P-201ENST00000516901 104 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 AC131281.1-201ENST00000522984 164 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS52Q8N1B4 AP002001.1-203ENST00000534002 267 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS52Q8N1B4 MIR4529-201ENST00000578110 78 ntBASIC2.26□□□□□ -2.05
VPS52Q8N1B4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.152-201ENST00000363578 100 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 U8.13-201ENST00000390842 128 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 RPL21P1-201ENST00000399532 476 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS52Q8N1B4 RNU1-131P-201ENST00000458943 161 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 RNU6-221P-201ENST00000459541 99 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms