Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 RN7SKP156-201ENST00000410308 342 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 HMGN2P31-201ENST00000432430 273 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 RPL39P39-201ENST00000455840 151 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 AC103810.1-201ENST00000579873 453 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 MIR3163-201ENST00000581592 73 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 uc_338.32-201ENST00000615087 172 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 AC012314.7-201ENST00000619693 93 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SCUBE3Q8IX30 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 Y_RNA.253-201ENST00000364562 112 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 RNU6-1274P-201ENST00000384557 107 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 RNU6-972P-201ENST00000391208 107 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 MIR1912-201ENST00000410389 80 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 SNORA59A-201ENST00000459326 152 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 AC022137.1-201ENST00000483735 151 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 SNORA70.24-201ENST00000517233 118 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 AC090115.4-201ENST00000609970 188 ntBASIC4.09□□□□□ -1.75
SCUBE3Q8IX30 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.76
SCUBE3Q8IX30 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCUBE3Q8IX30 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.09□□□□□ -1.76
SCUBE3Q8IX30 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.09□□□□□ -1.76
SCUBE3Q8IX30 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 RNA5SP97-201ENST00000365006 84 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1104P-201ENST00000384723 104 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC233266.1-201ENST00000454518 96 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 RNU7-164P-201ENST00000459221 62 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 ZNF720P1-201ENST00000562403 1939 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC087685.1-201ENST00000587507 141 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 FAM71BP1-201ENST00000604431 523 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC242852.1-201ENST00000612151 96 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC244015.1-201ENST00000622301 99 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 AC073346.2-201ENST00000624724 2058 ntBASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.08□□□□□ -1.76
SCUBE3Q8IX30 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 IPO8P1-201ENST00000455509 3109 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.290-201ENST00000364879 114 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 MIR34B-201ENST00000385076 84 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 RNU6-816P-201ENST00000390914 107 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1268P-201ENST00000391214 107 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1239P-201ENST00000391310 107 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 MIR1253-201ENST00000408273 105 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.601-201ENST00000410500 113 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 RPL23AP67-201ENST00000465341 474 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 RN7SL323P-201ENST00000494712 295 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SCUBE3Q8IX30 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.221-201ENST00000364248 96 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.244-201ENST00000364484 109 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1189P-201ENST00000383958 107 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 RNU6-242P-201ENST00000384359 107 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 RNU11-5P-201ENST00000391216 129 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 RN7SKP177-201ENST00000410567 355 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 AC025750.2-201ENST00000442609 450 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 HMGN2P18-201ENST00000450680 270 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 RNU7-70P-201ENST00000516941 66 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.714-201ENST00000517065 90 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 MIR3200-201ENST00000580767 85 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 MIR4765-201ENST00000585007 77 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 AC022217.4-201ENST00000604389 163 ntBASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCUBE3Q8IX30 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 RNU1-96P-201ENST00000364163 162 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 SNORA73.2-201ENST00000364946 201 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 MIR30B-201ENST00000384850 88 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms