Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 UQCRBP2-201ENST00000447827 297 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 AC074133.1-201ENST00000515696 183 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 SNORA25.10-201ENST00000515926 124 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 RNU6-107P-201ENST00000516643 102 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 AC005786.1-201ENST00000588553 154 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 AC104695.3-201ENST00000604052 296 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 snoZ196.1-201ENST00000625269 89 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 MIR4272-201ENST00000635924 64 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HERC6Q8IVU3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HERC6Q8IVU3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.162-201ENST00000363683 102 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 RNU6-738P-201ENST00000384531 106 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MIR329-1-201ENST00000385028 80 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MRPL42P3-201ENST00000401492 326 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MTCO3P19-201ENST00000415864 321 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 PCNPP5-201ENST00000452246 481 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 RNU6-856P-201ENST00000516959 98 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MIR4680-201ENST00000580906 66 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MIR4781-201ENST00000585250 76 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 AL360085.1-201ENST00000604713 532 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 U2.1-201ENST00000618978 145 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 AL606534.2-204ENST00000635008 178 ntBASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HERC6Q8IVU3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RNU6-708P-201ENST00000384217 107 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 SNORA51.11-201ENST00000384442 131 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AL355497.1-201ENST00000406262 551 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 MIR1287-201ENST00000408492 90 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 MIR1283-2-201ENST00000408621 87 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RNU6-57P-201ENST00000411348 103 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AC113618.1-201ENST00000416747 285 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.24□□□□□ -2.05
HERC6Q8IVU3 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 MIR5188-201ENST00000583467 113 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AC125232.2-201ENST00000592457 143 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.24□□□□□ -2.05
HERC6Q8IVU3 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
HERC6Q8IVU3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.24□□□□□ -2.05
HERC6Q8IVU3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.158-201ENST00000363651 101 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 SNORD87-201ENST00000364849 89 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 RNU6-1160P-201ENST00000384546 104 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 SNORA40.18-201ENST00000391200 128 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 MIR1253-201ENST00000408273 105 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 MTND2P23-201ENST00000422990 651 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.23□□□□□ -2.05
HERC6Q8IVU3 AC016717.1-201ENST00000448918 286 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.23□□□□□ -2.05
HERC6Q8IVU3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.23□□□□□ -2.05
HERC6Q8IVU3 GNAI2P1-201ENST00000541815 315 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 VN1R91P-201ENST00000594377 169 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 AC005592.1-201ENST00000566527 1640 ntBASIC2.23□□□□□ -2.05
HERC6Q8IVU3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
HERC6Q8IVU3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 Y_RNA.422-201ENST00000384054 114 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 RNU6-639P-201ENST00000384074 107 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 MIR548B-201ENST00000385247 97 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 AL512604.1-201ENST00000404812 257 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 RNA5SP504-201ENST00000410676 117 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.22□□□□□ -2.05
HERC6Q8IVU3 TOMM22P2-201ENST00000430735 237 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 AL353689.1-201ENST00000438895 199 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.22□□□□□ -2.05
HERC6Q8IVU3 AC112492.4-201ENST00000456549 352 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 RNU6-221P-201ENST00000459541 99 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 RNU6-327P-201ENST00000516270 127 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 AL442163.3-201ENST00000554110 156 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 AC110588.1-201ENST00000559699 137 ntBASIC2.22□□□□□ -2.05
HERC6Q8IVU3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
HERC6Q8IVU3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HERC6Q8IVU3 MIR340-201ENST00000362125 95 ntBASIC2.21□□□□□ -2.06
HERC6Q8IVU3 Y_RNA.527-201ENST00000384573 102 ntBASIC2.21□□□□□ -2.06
HERC6Q8IVU3 SNORA17.3-201ENST00000391159 129 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms