Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RPL30P14-201ENST00000482744 348 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AC109810.1-201ENST00000534066 224 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.7□□□□□ -1.98
VRK3Q8IV63 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.7□□□□□ -1.98
VRK3Q8IV63 MIR5006-201ENST00000583027 110 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 RPL17P51-201ENST00000605218 238 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 Y_RNA.802-201ENST00000614892 130 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VRK3Q8IV63 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VRK3Q8IV63 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.69□□□□□ -1.98
VRK3Q8IV63 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VRK3Q8IV63 RNU6-198P-201ENST00000384258 104 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 Y_RNA.572-201ENST00000384757 98 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VRK3Q8IV63 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 SNORA11.2-201ENST00000408318 127 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.69□□□□□ -1.98
VRK3Q8IV63 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 RNU6-453P-201ENST00000516819 85 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AC079598.5-201ENST00000547460 117 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AL391903.3-201ENST00000612158 163 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AC002076.2-201ENST00000617362 122 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 AC012640.5-201ENST00000623897 319 ntBASIC2.69□□□□□ -1.98
VRK3Q8IV63 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.69□□□□□ -1.98
VRK3Q8IV63 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VRK3Q8IV63 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VRK3Q8IV63 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VRK3Q8IV63 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VRK3Q8IV63 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VRK3Q8IV63 MIR26A1-201ENST00000362205 77 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.24-201ENST00000362508 103 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 SNORD114-7-201ENST00000362520 77 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RNU6-655P-201ENST00000362858 107 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.127-201ENST00000363386 109 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 SNORA80A-201ENST00000363922 136 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.273-201ENST00000364703 102 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.293-201ENST00000364908 93 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RNU6-215P-201ENST00000365169 102 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RNU4-11P-201ENST00000365287 132 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.337-201ENST00000365312 102 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 Y_RNA.341-201ENST00000365341 102 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 MIR548B-201ENST00000385247 97 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RPL30P13-201ENST00000418873 348 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 AL365496.1-201ENST00000426885 215 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
VRK3Q8IV63 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RNU7-197P-201ENST00000458836 62 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 RNU7-141P-201ENST00000459304 62 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
VRK3Q8IV63 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
VRK3Q8IV63 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.68□□□□□ -1.98
VRK3Q8IV63 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VRK3Q8IV63 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VRK3Q8IV63 AC108206.1-201ENST00000570186 4159 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
VRK3Q8IV63 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
VRK3Q8IV63 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VRK3Q8IV63 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.71-201ENST00000362892 104 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.111-201ENST00000363248 100 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.172-201ENST00000363765 102 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.218-201ENST00000364218 104 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.261-201ENST00000364631 102 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 Y_RNA.353-201ENST00000365440 108 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 RNU6-969P-201ENST00000383900 105 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 RNU6-144P-201ENST00000383951 107 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 RNU1-57P-201ENST00000384491 166 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 MIR147B-201ENST00000390185 80 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 RNU6-855P-201ENST00000410395 104 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 AC105272.1-201ENST00000438604 198 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 RNU1-117P-201ENST00000517041 158 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 AP000867.2-201ENST00000532468 320 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 MIR3605-201ENST00000583214 100 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 MIR3658-201ENST00000636291 56 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 AL159152.1-201ENST00000635019 2587 ntBASIC2.67□□□□□ -1.98
VRK3Q8IV63 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
VRK3Q8IV63 AL365361.1-201ENST00000566942 3481 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.66□□□□□ -1.98
VRK3Q8IV63 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VRK3Q8IV63 SNORD32B-201ENST00000364460 84 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 SNORD20-201ENST00000384550 80 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 MIR586-201ENST00000385035 97 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 MIR1185-2-201ENST00000408687 86 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms