Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RPS29P11-201ENST00000496507 171 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU6-107P-201ENST00000516643 102 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU1-104P-201ENST00000517280 175 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 MIR4303-201ENST00000581299 66 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AC008737.2-201ENST00000599446 118 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AC010205.1-201ENST00000616668 449 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 U6.92-201ENST00000636464 89 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
KRT28Q7Z3Y7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT28Q7Z3Y7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.57□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.153-201ENST00000363615 91 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 snosnR66.1-201ENST00000391095 99 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 MIR548F4-201ENST00000408515 105 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 SDAD1P3-201ENST00000427380 333 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 AC018868.1-201ENST00000491307 315 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 AC010469.2-201ENST00000496412 480 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 ATP5EP1-201ENST00000510257 156 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 RNU6-1045P-201ENST00000516321 107 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 AC034114.1-201ENST00000520293 285 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 MIR4659A-201ENST00000580269 81 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 MIR4753-201ENST00000585119 83 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 AL121655.1-201ENST00000605811 308 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.56□□□□□ -2
KRT28Q7Z3Y7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRT28Q7Z3Y7 AC068205.3-201ENST00000636385 468 ntBASIC2.56□□□□□ -2
KRT28Q7Z3Y7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRT28Q7Z3Y7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT28Q7Z3Y7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
KRT28Q7Z3Y7 SNORD87-201ENST00000364849 89 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 SNORA63.7-201ENST00000365579 123 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 SNORA67.2-201ENST00000384300 149 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.551-201ENST00000384661 102 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 MIR300-201ENST00000401138 83 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 MIR1252-201ENST00000408861 65 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 U8.20-201ENST00000459445 131 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
KRT28Q7Z3Y7 SNORA40.9-201ENST00000515895 93 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.715-201ENST00000517082 110 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.720-201ENST00000517166 92 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.55□□□□□ -2
KRT28Q7Z3Y7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
KRT28Q7Z3Y7 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AL021879.1-201ENST00000611756 288 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AC011476.5-201ENST00000615594 130 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AC240442.1-201ENST00000616055 283 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AL078596.1-201ENST00000624856 447 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.459-201ENST00000384251 102 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 MIR1283-1-201ENST00000408494 87 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 AC074290.1-201ENST00000448883 135 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 MTND5P22-201ENST00000458380 195 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 RNU6-408P-201ENST00000515910 100 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.54□□□□□ -2
KRT28Q7Z3Y7 AC136443.5-201ENST00000603741 370 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 AL355297.3-201ENST00000604082 446 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
KRT28Q7Z3Y7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.276-201ENST00000364732 109 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 MRPL35P1-201ENST00000404272 572 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 RNA5SP504-201ENST00000410676 117 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AL358176.2-201ENST00000425769 204 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 RPEP5-201ENST00000441137 268 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AC073910.1-201ENST00000445047 438 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AL137159.1-201ENST00000452808 512 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 RNU6-625P-201ENST00000459412 107 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AC114982.1-201ENST00000469402 321 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 RPL26P26-201ENST00000480251 434 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AC067942.3-201ENST00000512025 362 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AC074133.1-201ENST00000515696 183 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 RNU6-397P-201ENST00000516226 104 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
KRT28Q7Z3Y7 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 MIR5694-201ENST00000581190 76 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 AC008873.1-201ENST00000625051 138 ntBASIC2.53□□□□□ -2
KRT28Q7Z3Y7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRT28Q7Z3Y7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2.01
KRT28Q7Z3Y7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 AC010655.3-201ENST00000478818 450 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 AC093259.1-201ENST00000509755 300 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 HMGB3P3-201ENST00000510526 400 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms