Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC004866.1-201ENST00000411748 78 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 AC016909.1-201ENST00000415916 166 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 MTATP6P16-201ENST00000434543 526 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.23□□□□□ -2.45
USP54Q70EL1 AL031274.1-201ENST00000450334 232 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 RNU6-58P-201ENST00000517143 103 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 SNORA25.17-201ENST00000517184 124 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 AC104383.1-201ENST00000530297 370 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 FGF7P1-201ENST00000582820 288 ntBASIC-0.23□□□□□ -2.45
USP54Q70EL1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.23□□□□□ -2.45
USP54Q70EL1 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 RNA5SP494-201ENST00000410653 129 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 RPS27AP14-201ENST00000422868 454 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 MIR4438-201ENST00000585271 93 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC080013.3-201ENST00000606839 578 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC009878.1-201ENST00000621819 340 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 SNORD71-201ENST00000411292 86 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 RPS3AP17-201ENST00000472594 777 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 RNU6-341P-201ENST00000516973 96 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC093027.1-201ENST00000546698 429 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.24□□□□□ -2.45
USP54Q70EL1 AL359999.1-201ENST00000604513 294 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AL355073.2-201ENST00000612106 557 ntBASIC-0.24□□□□□ -2.45
USP54Q70EL1 AC005592.1-201ENST00000566527 1640 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 MIR526A1-201ENST00000384897 85 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 MT-TQ-201ENST00000387372 72 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 AL117339.3-201ENST00000418733 162 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 MTCO2P3-201ENST00000442543 421 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 HMGN2P26-201ENST00000463169 339 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 SNORA40.12-201ENST00000516329 111 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 AC069113.1-201ENST00000517763 267 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 AC026371.1-201ENST00000551867 419 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 RNU6-94P-201ENST00000607728 107 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 uc_338.6-201ENST00000613544 171 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 AL031667.3-201ENST00000620124 655 ntBASIC-0.25□□□□□ -2.45
USP54Q70EL1 SNORA42.1-201ENST00000363515 137 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RNU6-934P-201ENST00000365154 107 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 MIR520G-201ENST00000385064 90 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 MIR520H-201ENST00000385126 88 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 MIR136-201ENST00000385207 82 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 MIR643-201ENST00000385267 97 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RNU2-59P-201ENST00000410482 191 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RN7SKP142-201ENST00000411236 328 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RPS26P42-201ENST00000413485 326 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.26□□□□□ -2.45
USP54Q70EL1 USP9YP29-201ENST00000445112 563 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.26□□□□□ -2.45
USP54Q70EL1 RNU7-128P-201ENST00000517247 62 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 MIR4764-201ENST00000580680 88 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.26□□□□□ -2.45
USP54Q70EL1 AC010999.1-201ENST00000611856 324 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 AC027807.2-201ENST00000616099 408 ntBASIC-0.26□□□□□ -2.45
USP54Q70EL1 RNU6-550P-201ENST00000391057 101 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 RNU2-56P-201ENST00000516826 190 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.27□□□□□ -2.45
USP54Q70EL1 AL021368.1-201ENST00000607490 540 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 uc_338.16-201ENST00000621804 95 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 RNU6-245P-201ENST00000384020 107 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 SNORD70.1-201ENST00000391007 85 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 RNU7-56P-201ENST00000458744 62 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.27□□□□□ -2.45
USP54Q70EL1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.27□□□□□ -2.45
USP54Q70EL1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.27□□□□□ -2.45
USP54Q70EL1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.27□□□□□ -2.45
USP54Q70EL1 FRG2DP-202ENST00000566967 323 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 MIR3612-201ENST00000579753 87 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 AC006435.5-201ENST00000624486 112 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 AC019226.2-201ENST00000625973 424 ntBASIC-0.27□□□□□ -2.45
USP54Q70EL1 MIR409-201ENST00000362237 79 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 RNA5SP517-201ENST00000364724 117 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.28□□□□□ -2.45
USP54Q70EL1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.28□□□□□ -2.45
USP54Q70EL1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.28□□□□□ -2.45
USP54Q70EL1 HSPE1P23-201ENST00000509838 286 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 RNU7-43P-201ENST00000516554 64 ntBASIC-0.28□□□□□ -2.45
USP54Q70EL1 MRPS36P4-201ENST00000534436 298 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms