Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 RNU6-948P-201ENST00000516374 107 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 MTND1P36-201ENST00000522384 936 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC115990.1-201ENST00000526957 301 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC104383.1-201ENST00000530297 370 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC138649.3-201ENST00000622154 254 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AP002782.1-201ENST00000623107 614 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 snoZ40.1-201ENST00000364540 72 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 RNU6-205P-201ENST00000390858 107 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 TIMM9P2-201ENST00000419324 266 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 MTND4LP14-201ENST00000429447 288 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 MIR4263-201ENST00000584745 83 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC008752.3-201ENST00000588113 712 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC011921.3-201ENST00000605540 361 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AL359697.1-201ENST00000624879 587 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 MIR452-201ENST00000385020 85 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 MIR501-201ENST00000390204 84 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 MIR320C1-201ENST00000408566 88 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 HSFY5P-201ENST00000453726 309 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 AC079382.1-201ENST00000493346 557 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 MTND3P5-201ENST00000512798 333 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 RNU6-64P-201ENST00000517119 105 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 MIR3912-201ENST00000577566 105 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 SNORA28-201ENST00000606769 126 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 RMST_7.1-201ENST00000621935 268 ntBASIC-0.45□□□□□ -2.48
CSPG4Q6UVK1 RNU4-84P-201ENST00000364200 139 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AL355143.1-201ENST00000407101 841 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RPL21P38-201ENST00000418090 167 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC078809.1-201ENST00000427601 140 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 MTND4P32-201ENST00000437189 1237 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC009237.7-201ENST00000447357 229 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AL360271.2-201ENST00000447710 161 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC087499.4-201ENST00000448505 178 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-953P-201ENST00000459154 107 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU7-140P-201ENST00000459546 60 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC010468.3-201ENST00000508225 458 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU7-12P-201ENST00000516030 62 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-677P-201ENST00000516914 101 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 SNORA74.3-201ENST00000517108 154 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC013828.2-201ENST00000532487 235 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC133485.4-201ENST00000561835 220 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 MIR4264-201ENST00000583520 66 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU1-29P-201ENST00000606574 126 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AL139022.2-201ENST00000606934 443 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-527P-201ENST00000363425 104 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-353P-201ENST00000364266 108 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-975P-201ENST00000384296 105 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-549P-201ENST00000384433 107 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AL136310.1-201ENST00000404926 654 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC004866.1-201ENST00000411748 78 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AL953862.1-201ENST00000423016 168 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC007283.2-201ENST00000424739 197 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC005002.2-201ENST00000438228 269 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC022447.4-201ENST00000504053 364 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 DEFB130C-202ENST00000530001 230 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 CR383656.4-201ENST00000546909 122 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AC103996.1-201ENST00000555468 102 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 DEFB131E-202ENST00000602581 683 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 AP001033.2-201ENST00000609701 1003 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 MIR6740-201ENST00000618268 113 ntBASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.46□□□□□ -2.48
CSPG4Q6UVK1 RNU6-726P-201ENST00000364680 107 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MIR558-201ENST00000384920 94 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC106883.1-201ENST00000418805 562 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 SNAP23P1-201ENST00000433229 246 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNU7-57P-201ENST00000459540 60 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC114755.3-201ENST00000481111 251 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNU6-475P-201ENST00000516073 104 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC023632.1-201ENST00000518463 375 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MIR4778-201ENST00000577635 80 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC090897.1-201ENST00000580909 226 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC091178.2-201ENST00000584401 117 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MTND4P4-201ENST00000439033 1366 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 SNORD68-201ENST00000363214 84 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNU6-187P-201ENST00000384139 106 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MIR562-201ENST00000384894 95 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNA5SP482-201ENST00000391269 118 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms