Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC100812.1-201ENST00000607622 580 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.3-201ENST00000362331 103 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 RNU6-1059P-201ENST00000363752 98 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.453-201ENST00000384223 109 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NIPAL3Q6P499 AL034345.1-201ENST00000407768 123 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 RNU6-1148P-201ENST00000410992 104 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 USP9YP16-201ENST00000430287 407 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 USP9YP30-201ENST00000430729 455 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 MTND1P17-201ENST00000448961 204 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 USP9YP23-201ENST00000455085 407 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 RNU6-1114P-201ENST00000516022 107 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 MIR4438-201ENST00000585271 93 ntBASIC1.17□□□□□ -2.22
NIPAL3Q6P499 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 SNORD65B-201ENST00000459126 73 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 RPS27P22-201ENST00000478056 241 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AC027419.1-201ENST00000522976 328 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 MIR4790-201ENST00000577799 79 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AL390123.1-201ENST00000603216 237 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AL021879.1-201ENST00000611756 288 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 AC099654.5-201ENST00000636479 350 ntBASIC1.16□□□□□ -2.22
NIPAL3Q6P499 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
NIPAL3Q6P499 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.318-201ENST00000365131 97 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 RNU1-139P-201ENST00000391307 165 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 MRPS10P1-201ENST00000448483 130 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC023157.2-201ENST00000540596 141 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC093023.1-201ENST00000547375 507 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 MIR3124-201ENST00000582636 67 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AL162424.1-201ENST00000602325 221 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 AC006435.5-201ENST00000624486 112 ntBASIC1.15□□□□□ -2.23
NIPAL3Q6P499 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NIPAL3Q6P499 RNU6-222P-201ENST00000362438 107 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.48-201ENST00000362710 103 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 RNU6-281P-201ENST00000384212 103 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 RNU6-842P-201ENST00000384269 107 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.516-201ENST00000384541 124 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 SNORD115-47-201ENST00000391226 86 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AL589823.1-201ENST00000429577 183 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.14□□□□□ -2.23
NIPAL3Q6P499 SNORD5.1-201ENST00000458800 75 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 RPL39P38-201ENST00000467018 153 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AC010469.2-201ENST00000496412 480 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 RNU6-237P-201ENST00000515985 71 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 CBX3P8-201ENST00000532412 525 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AL513423.1-201ENST00000621695 132 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.14□□□□□ -2.23
NIPAL3Q6P499 SNORD3E-202ENST00000627253 216 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 MIR3688-2-201ENST00000636963 87 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AC091812.1-201ENST00000432235 1948 ntBASIC1.14□□□□□ -2.23
NIPAL3Q6P499 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.106-201ENST00000363189 100 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.301-201ENST00000364990 103 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.595-201ENST00000410403 105 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC010598.1-201ENST00000510378 103 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 RNU4-49P-201ENST00000516080 140 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AL121579.1-201ENST00000555129 305 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC090617.3-201ENST00000573670 475 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 AC073349.3-201ENST00000617616 186 ntBASIC1.13□□□□□ -2.23
NIPAL3Q6P499 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
NIPAL3Q6P499 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NIPAL3Q6P499 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NIPAL3Q6P499 RNU6-1215P-201ENST00000384441 102 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 FGF7P8-201ENST00000402994 292 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 AC092989.1-201ENST00000481235 277 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 RPS29P25-201ENST00000481709 171 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 AL133373.1-201ENST00000497098 94 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.682-201ENST00000516457 100 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 CYCSP23-201ENST00000519781 313 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.12□□□□□ -2.23
NIPAL3Q6P499 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 SNORA28-201ENST00000606769 126 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 AC068647.2-201ENST00000637380 353 ntBASIC1.12□□□□□ -2.23
NIPAL3Q6P499 MTND5P16-201ENST00000460269 1703 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms