Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 RNU6-417P-201ENST00000384712 107 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 MIR329-1-201ENST00000385028 80 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 MIR1304-201ENST00000408243 91 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 RPL23AP50-201ENST00000434149 455 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 RPL26P26-201ENST00000480251 434 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 MIR2355-201ENST00000517199 87 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 RNU4-42P-201ENST00000364738 142 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 RNU6-1145P-201ENST00000384246 107 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.474-201ENST00000384341 102 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.557-201ENST00000384680 107 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 RNU4-14P-201ENST00000410858 122 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 RNU6-370P-201ENST00000411008 104 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AP1B1P2-201ENST00000416196 106 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 MTND4P17-201ENST00000470444 350 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AC074133.1-201ENST00000515696 183 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 HSBP1P1-201ENST00000555205 166 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 MIR3684-201ENST00000579779 74 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AC125232.2-201ENST00000592457 143 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AC113139.1-201ENST00000605049 239 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AL359075.3-201ENST00000613288 217 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AC006435.5-201ENST00000624486 112 ntBASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC30Q5VVM6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 RNU6-874P-201ENST00000362390 105 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 RNU6-1188P-201ENST00000363795 107 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.390-201ENST00000383932 102 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 SNORA75.6-201ENST00000391318 127 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 AL354695.1-201ENST00000427935 228 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 SUB1P3-201ENST00000564581 315 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 UBE2V2P2-201ENST00000587677 504 ntBASIC1.89□□□□□ -2.11
CCDC30Q5VVM6 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.577-201ENST00000384794 101 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RNU7-95P-201ENST00000459222 64 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RNU7-87P-201ENST00000459343 62 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RN7SKP49-201ENST00000516675 260 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RNU1-142P-201ENST00000516682 145 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 APOOP3-201ENST00000536787 586 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 RBM11P1-201ENST00000604951 799 ntBASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.142-201ENST00000363491 102 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 RNU6-338P-201ENST00000383888 105 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 RNU6-997P-201ENST00000384725 107 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 RNA5SP323-201ENST00000391094 133 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 MIR1267-201ENST00000408723 78 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC092423.1-201ENST00000430165 186 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC023790.1-201ENST00000482174 347 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC091144.1-201ENST00000519573 138 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC080078.3-201ENST00000605407 463 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AC104260.1-201ENST00000616660 539 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 AP000648.3-201ENST00000623539 4507 ntBASIC1.87□□□□□ -2.11
CCDC30Q5VVM6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 MIR410-201ENST00000362222 80 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 RNU6-310P-201ENST00000384655 107 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 RNA5SP467-201ENST00000391274 118 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 UQCRBP2-201ENST00000447827 297 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 snoU13.27-201ENST00000459278 104 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 RNU6-1213P-201ENST00000517075 94 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 RNU6-264P-201ENST00000517134 104 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 SNORA77B-201ENST00000578179 125 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 AC133104.2-201ENST00000615272 193 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.86□□□□□ -2.11
CCDC30Q5VVM6 SNORA33-201ENST00000363664 130 ntBASIC1.85□□□□□ -2.11
CCDC30Q5VVM6 RNU6-879P-201ENST00000364328 108 ntBASIC1.85□□□□□ -2.11
CCDC30Q5VVM6 Y_RNA.358-201ENST00000365491 99 ntBASIC1.85□□□□□ -2.11
CCDC30Q5VVM6 MTCYBP4-201ENST00000401524 249 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms