Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 SNORD114-7-201ENST00000362520 77 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 RNU6-862P-201ENST00000362804 105 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 SNORD113-8-201ENST00000363497 74 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 RNU6-271P-201ENST00000363858 105 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 SNORD115-30-201ENST00000364117 82 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 SNORA9-201ENST00000384215 133 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AL117342.1-201ENST00000404861 406 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AL355796.1-201ENST00000406706 323 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 MIR548F4-201ENST00000408515 105 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 RNU4-30P-201ENST00000410245 143 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 Z92545.1-201ENST00000411782 234 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 RNU6-635P-201ENST00000516651 102 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AC008269.2-201ENST00000561915 1105 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 MIR3200-201ENST00000580767 85 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 U1.36-201ENST00000620684 176 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AC022513.1-201ENST00000624512 117 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 AL137790.1-201ENST00000634283 177 ntBASIC2.37□□□□□ -2.03
RNF220Q5VTB9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.105-201ENST00000363182 111 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 RNU6-324P-201ENST00000363957 106 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 RNU6-121P-201ENST00000410525 99 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AL358176.2-201ENST00000425769 204 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 CST2P1-201ENST00000425770 87 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AL121890.1-201ENST00000435457 205 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
RNF220Q5VTB9 DYNLT3P2-201ENST00000442517 295 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AC096725.1-201ENST00000514266 313 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AC027419.1-201ENST00000522976 328 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
RNF220Q5VTB9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 CENPCP1-201ENST00000533085 2578 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 SNORA27.1-201ENST00000362604 124 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.64-201ENST00000362845 102 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 RNU1-96P-201ENST00000364163 162 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 RNU6-806P-201ENST00000365147 105 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.602-201ENST00000410535 92 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AC099677.2-201ENST00000436385 175 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 RNU6-966P-201ENST00000516479 104 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 AP003733.2-201ENST00000529409 171 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 MTND5P6-201ENST00000422338 1798 ntBASIC2.35□□□□□ -2.03
RNF220Q5VTB9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RNF220Q5VTB9 RNU4-90P-201ENST00000362773 141 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RNU6-238P-201ENST00000363313 106 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.176-201ENST00000363815 109 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 SNORA48.2-201ENST00000390926 124 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 MIR873-201ENST00000401120 77 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RNA5SP501-201ENST00000410990 112 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RPS27P22-201ENST00000478056 241 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 HMGB3P17-201ENST00000504195 649 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RN7SKP132-201ENST00000516001 208 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 SNORA70.12-201ENST00000516084 153 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RNU6-496P-201ENST00000516145 99 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 RNU6-436P-201ENST00000516171 114 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF220Q5VTB9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF220Q5VTB9 U6.73-201ENST00000619194 103 ntBASIC2.34□□□□□ -2.03
RNF220Q5VTB9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
RNF220Q5VTB9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF220Q5VTB9 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 RNU6-407P-201ENST00000365280 104 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.361-201ENST00000365515 120 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 RNU6-713P-201ENST00000384761 107 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.574-201ENST00000384766 95 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 RNU6-1105P-201ENST00000384774 107 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 Y_RNA.581-201ENST00000391017 97 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF220Q5VTB9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF220Q5VTB9 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 AC098869.1-201ENST00000481627 292 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 RNA5SP20-201ENST00000515976 84 ntBASIC2.33□□□□□ -2.04
RNF220Q5VTB9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms