Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RPL21P9-201ENST00000556149 474 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AL390123.1-201ENST00000603216 237 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AC012507.3-201ENST00000603556 477 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AL358072.1-201ENST00000604156 575 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AL662814.1-201ENST00000617364 121 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 U6.107-201ENST00000637108 79 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AC100767.1-201ENST00000528178 123 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AGGF1P4-201ENST00000568249 801 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AP000753.3-201ENST00000604083 169 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AC244669.1-204ENST00000621564 178 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 AL590396.2-201ENST00000636511 1041 ntBASIC-0.75□□□□□ -2.53
VPS13DQ5THJ4 SGO1P1-201ENST00000603525 1447 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 MTND3P20-201ENST00000407663 186 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 MIR1257-201ENST00000408490 117 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AP001189.2-201ENST00000527320 189 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AL161798.1-201ENST00000604630 131 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 RNU6-562P-201ENST00000362731 107 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 snoU13.8-201ENST00000458890 104 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 MTND2P38-201ENST00000522536 667 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC012433.1-201ENST00000588916 398 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC120024.3-201ENST00000603167 156 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC005332.6-201ENST00000613178 446 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 ZNF299P-201ENST00000406845 1804 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 RNU6-78P-201ENST00000362897 107 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 MIR496-201ENST00000385226 102 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC025459.1-201ENST00000504072 156 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC026616.1-201ENST00000523157 525 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AC138749.4-201ENST00000563970 127 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 AL353803.5-201ENST00000599815 141 ntBASIC-0.76□□□□□ -2.53
VPS13DQ5THJ4 CDR1-202ENST00000625883 1485 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AL031779.1-201ENST00000415663 330 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 RNU7-41P-201ENST00000515917 61 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 DEFB131E-201ENST00000532329 154 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 DEFB131E-202ENST00000602581 683 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 RNU6-487P-201ENST00000365430 104 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 RPL39P34-201ENST00000477141 156 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 RNU6-469P-201ENST00000516253 101 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 MIR3923-201ENST00000579521 83 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC016907.1-201ENST00000419483 435 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 USP9YP28-201ENST00000435142 589 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 MTND4P25-201ENST00000441039 533 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 SCARNA18B-201ENST00000458806 135 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC103996.1-201ENST00000555468 102 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 AL450472.1-202ENST00000637286 180 ntBASIC-0.77□□□□□ -2.53
VPS13DQ5THJ4 SNORD24-201ENST00000383884 75 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 RNU7-12P-201ENST00000516030 62 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 MIR4676-201ENST00000583078 72 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC004223.4-201ENST00000612426 332 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC091304.10-201ENST00000641554 121 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 RNU7-102P-201ENST00000458948 62 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 RNU6-759P-201ENST00000516740 103 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC095057.3-201ENST00000567102 1157 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL162376.1-201ENST00000624117 175 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 MIR549A-201ENST00000385268 96 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 MTND1P21-201ENST00000412991 285 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC010154.1-201ENST00000425857 269 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL158053.1-201ENST00000441503 453 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL606517.2-201ENST00000442855 241 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 SNORA28-201ENST00000606769 126 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL138752.1-201ENST00000452964 351 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AC011352.1-201ENST00000512300 793 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 RNU6-63P-201ENST00000516690 95 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 AL117336.2-201ENST00000602435 335 ntBASIC-0.78□□□□□ -2.53
VPS13DQ5THJ4 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms