Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 MAPK10-373ENST00000641983 6772 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 SNORA44-201ENST00000384584 132 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 MIR590-201ENST00000385008 97 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AC006989.1-201ENST00000427212 131 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AL353705.1-201ENST00000433468 480 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 SNORD65B-201ENST00000459126 73 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 HMGN2P9-201ENST00000476875 229 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 RNU6-113P-201ENST00000516653 101 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AL929325.1-201ENST00000603096 117 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AC091152.3-201ENST00000604227 325 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.27□□□□□ -1.73
RC3H1Q5TC82 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RC3H1Q5TC82 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNA5SP511-201ENST00000410487 115 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNU7-170P-201ENST00000459303 61 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 AC010531.2-201ENST00000465012 153 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNA5SP20-201ENST00000515976 84 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNU6-126P-201ENST00000516685 103 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNU6-158P-201ENST00000517104 100 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 AC007751.1-201ENST00000529260 376 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 AC011602.1-201ENST00000546484 331 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNVU1-4-201ENST00000612985 164 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 Pinc.1-201ENST00000616452 154 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 Y_RNA.818-201ENST00000618813 71 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 MIR2052-201ENST00000636055 55 ntBASIC4.26□□□□□ -1.73
RC3H1Q5TC82 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RC3H1Q5TC82 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 RNU4-13P-201ENST00000364019 141 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 VDAC1P3-201ENST00000434069 851 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 MTATP8P2-201ENST00000435212 202 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 SNORD11-201ENST00000459124 84 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 HIGD1AP1-201ENST00000550979 275 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 AL137067.1-201ENST00000615933 120 ntBASIC4.25□□□□□ -1.73
RC3H1Q5TC82 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RC3H1Q5TC82 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 AC026241.1-201ENST00000517873 2142 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 Y_RNA.203-201ENST00000364106 102 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 AC007064.1-201ENST00000412238 351 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 AL159169.1-201ENST00000421119 127 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 AC107083.1-201ENST00000439643 279 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 RNU7-57P-201ENST00000459540 60 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 AC015720.1-201ENST00000565251 277 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 MIR4662B-201ENST00000579498 81 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 SNORD115-40-201ENST00000606510 82 ntBASIC4.24□□□□□ -1.73
RC3H1Q5TC82 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
RC3H1Q5TC82 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RC3H1Q5TC82 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.23□□□□□ -1.73
RC3H1Q5TC82 MIR423-201ENST00000362201 94 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 Y_RNA.66-201ENST00000362862 102 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 RNU1-18P-201ENST00000363062 164 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 RNU6-1210P-201ENST00000363775 107 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 RNU6-1138P-201ENST00000365359 106 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 Y_RNA.486-201ENST00000384398 107 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 MIR181A2-201ENST00000384863 110 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 SNORA12-201ENST00000391162 147 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.23□□□□□ -1.73
RC3H1Q5TC82 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 ATP5EP1-201ENST00000510257 156 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 RNU7-149P-201ENST00000516739 59 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 SNORD19.2-201ENST00000516978 73 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
RC3H1Q5TC82 HMGN2P15-201ENST00000585707 270 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 MALAT1.1-201ENST00000618249 95 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 AC002064.3-201ENST00000623448 346 ntBASIC4.23□□□□□ -1.73
RC3H1Q5TC82 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AC000403.1-201ENST00000613696 3585 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AP001486.2-201ENST00000561652 5113 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 MIR494-201ENST00000349529 81 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 RNU6-655P-201ENST00000362858 107 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AL031121.1-201ENST00000406553 254 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AL441985.1-201ENST00000457727 251 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 OR9P1P-201ENST00000496431 281 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms