Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 RNU2-54P-201ENST00000410299 190 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 RNU5A-5P-201ENST00000411054 116 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 RNU6-1199P-201ENST00000411249 104 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 MIR4319-201ENST00000577285 85 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 MIR5094-201ENST00000578766 85 ntBASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ATPAF1Q5TC12 Y_RNA.183-201ENST00000363882 113 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 Y_RNA.214-201ENST00000364201 112 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 Y_RNA.243-201ENST00000364481 109 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 Y_RNA.462-201ENST00000384268 102 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 RNU2-52P-201ENST00000410680 190 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 ELOCP20-201ENST00000422460 345 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 DPH3P2-201ENST00000422618 250 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AC010655.3-201ENST00000478818 450 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 RNU6-155P-201ENST00000516347 100 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AC006023.1-201ENST00000603944 259 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AC022441.3-201ENST00000605737 136 ntBASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATPAF1Q5TC12 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.105-201ENST00000363182 111 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 SNORD115-30-201ENST00000364117 82 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 SNORD63-201ENST00000384262 68 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 RNU4-30P-201ENST00000410245 143 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AC073910.1-201ENST00000445047 438 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 RPL23AP3-201ENST00000453844 468 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 RNU7-110P-201ENST00000516891 62 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AC023157.2-201ENST00000540596 141 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 MIR3684-201ENST00000579779 74 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 MIR3162-201ENST00000581818 82 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AC006380.1-201ENST00000603598 186 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 AC011373.1-201ENST00000607270 237 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 U1.36-201ENST00000620684 176 ntBASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATPAF1Q5TC12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MIR196B-201ENST00000384852 84 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MIR27B-201ENST00000385129 97 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AC108938.1-201ENST00000451204 136 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 RPS27P22-201ENST00000478056 241 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MRPS35P2-201ENST00000508242 191 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 RNY3P15-201ENST00000516297 97 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 SNORA40.15-201ENST00000516884 107 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.720-201ENST00000517166 92 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AC008737.2-201ENST00000599446 118 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AL360085.1-201ENST00000604713 532 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 AC005828.6-201ENST00000606610 232 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 MIR376A1-201ENST00000616574 68 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.26-201ENST00000362539 101 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 SNORA27.1-201ENST00000362604 124 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.124-201ENST00000363339 93 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 RNU6-770P-201ENST00000363929 105 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 RNU6-806P-201ENST00000365147 105 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.331-201ENST00000365267 102 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 RNU6-407P-201ENST00000365280 104 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.510-201ENST00000384511 114 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 RNU6-738P-201ENST00000384531 106 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 SNORA11.4-201ENST00000408823 129 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 RNU6-121P-201ENST00000410525 99 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 MTATP8P1-201ENST00000467115 207 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 AL137100.2-201ENST00000555786 315 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 MIR4300-201ENST00000581016 96 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 AC116312.1-201ENST00000606841 314 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 AC006435.5-201ENST00000624486 112 ntBASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATPAF1Q5TC12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.152-201ENST00000363578 100 ntBASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 RNA5SP68-201ENST00000363885 119 ntBASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 RNU6-324P-201ENST00000363957 106 ntBASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 Y_RNA.286-201ENST00000364813 102 ntBASIC2.12□□□□□ -2.07
ATPAF1Q5TC12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 454.3 ms