Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 Y_RNA.590-201ENST00000410140 107 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 RNU6-651P-201ENST00000411040 105 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 RNU2-14P-201ENST00000411053 191 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 MICF-203ENST00000432679 129 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 ATP5EP1-201ENST00000510257 156 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 RNU4-71P-201ENST00000516258 113 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 AC130289.1-201ENST00000577321 73 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 MIR4753-201ENST00000585119 83 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 AL162424.1-201ENST00000602325 221 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 RPL17P51-201ENST00000605218 238 ntBASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC178Q5BJE1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 SNORA67.2-201ENST00000384300 149 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 SNORA67.4-201ENST00000384688 142 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 RNU2-32P-201ENST00000411193 191 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 TOMM22P2-201ENST00000430735 237 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 HMGN2P9-201ENST00000476875 229 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 AC109329.2-201ENST00000519658 482 ntBASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC178Q5BJE1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 MIR449A-201ENST00000362113 91 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU4-82P-201ENST00000362443 140 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 Y_RNA.76-201ENST00000362931 109 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU6-200P-201ENST00000364743 107 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU6-438P-201ENST00000365561 103 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU6-546P-201ENST00000383991 107 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 U3.40-201ENST00000408706 208 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AL161788.1-201ENST00000441805 169 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RPL23AP94-201ENST00000512518 302 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNA5SP82-201ENST00000516707 92 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC009779.6-201ENST00000603972 165 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC005828.6-201ENST00000606610 232 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 AC008873.1-201ENST00000625051 138 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 MIR1291-201ENST00000627649 87 ntBASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC178Q5BJE1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 Y_RNA.274-201ENST00000364714 101 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 Y_RNA.275-201ENST00000364726 110 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 Y_RNA.297-201ENST00000364950 91 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 MIR586-201ENST00000385035 97 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 MIR1298-201ENST00000408783 112 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 RNU2-63P-201ENST00000410792 194 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 RNU2-61P-201ENST00000411069 191 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 AC016717.1-201ENST00000448918 286 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 RNU2-12P-201ENST00000517216 168 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 AL355297.2-201ENST00000604792 129 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 MIR1248-201ENST00000629190 106 ntBASIC2.84□□□□□ -1.95
CCDC178Q5BJE1 ZNF271P-202ENST00000465539 1970 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 Y_RNA.200-201ENST00000364018 102 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 RNU6-220P-201ENST00000390919 107 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 RNU7-57P-201ENST00000459540 60 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 SNORD116-28-201ENST00000516123 91 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 SNORA27.4-201ENST00000516650 95 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 AC025754.2-201ENST00000606491 432 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 AC103810.6-201ENST00000606708 136 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 AC067747.1-201ENST00000608026 250 ntBASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC178Q5BJE1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 Y_RNA.199-201ENST00000364014 102 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 SNORD114-30-201ENST00000364448 72 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 SNORA67.1-201ENST00000364749 141 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 MIR300-201ENST00000401138 83 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 AL031003.1-201ENST00000404229 172 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 RNU6-57P-201ENST00000411348 103 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 Z82209.1-201ENST00000422141 2135 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 CR769767.1-201ENST00000436337 346 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 AC074290.1-201ENST00000448883 135 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 RN7SL636P-201ENST00000497504 294 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 AC234781.5-201ENST00000508429 271 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 AC026436.1-201ENST00000510537 270 ntBASIC2.82□□□□□ -1.96
CCDC178Q5BJE1 RNU6-436P-201ENST00000516171 114 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms