Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC136932.1-201ENST00000574771 208 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 AL360085.1-201ENST00000604713 532 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-937P-201ENST00000384325 106 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AC008134.1-201ENST00000420943 193 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AC073910.1-201ENST00000445047 438 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 RN7SL636P-201ENST00000497504 294 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.720-201ENST00000517166 92 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 RNU2-12P-201ENST00000517216 168 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 AL353149.1-201ENST00000610667 244 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.14□□□□□ -2.07
RUNDC3AQ59EK9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.105-201ENST00000363182 111 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 HMGN2P34-201ENST00000437647 269 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 SUMO2P18-201ENST00000518873 252 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 AC116312.1-201ENST00000606841 314 ntBASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RUNDC3AQ59EK9 MIR449A-201ENST00000362113 91 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.145-201ENST00000363527 102 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 SNORA72.2-201ENST00000365028 127 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 SNORA6-201ENST00000384033 151 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AL355796.1-201ENST00000406706 323 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1199P-201ENST00000411249 104 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 ELOCP20-201ENST00000422460 345 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 DPH3P2-201ENST00000422618 250 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AC099677.2-201ENST00000436385 175 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 SNORD65B-201ENST00000459126 73 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 YWHAEP4-201ENST00000505390 198 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 MRPS35P2-201ENST00000508242 191 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 MIR4300-201ENST00000581016 96 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 U6.115-201ENST00000636045 103 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 MIR338-201ENST00000636369 67 ntBASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 SNORD115-30-201ENST00000364117 82 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 SNORD63-201ENST00000384262 68 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 RNU2-54P-201ENST00000410299 190 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-121P-201ENST00000410525 99 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AC009963.1-201ENST00000417265 157 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 MTND2P23-201ENST00000422990 651 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AL118496.2-201ENST00000448300 230 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 MTATP8P1-201ENST00000467115 207 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AC008737.2-201ENST00000599446 118 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AC022441.3-201ENST00000605737 136 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AC005828.6-201ENST00000606610 232 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RUNDC3AQ59EK9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-862P-201ENST00000362804 105 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 SNORA33-201ENST00000363664 130 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.243-201ENST00000364481 109 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-806P-201ENST00000365147 105 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 SNORA20B-201ENST00000384220 132 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms