Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNORA3A-201ENST00000364113 130 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.331-201ENST00000365267 102 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RNU2-20P-201ENST00000410425 191 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AC096920.1-201ENST00000423991 241 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 ATP5J2P3-201ENST00000451550 258 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AC011406.1-201ENST00000512440 370 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 MTCO2P24-201ENST00000515611 426 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP24-201ENST00000516478 95 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AP003733.2-201ENST00000529409 171 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 U6.115-201ENST00000636045 103 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.133-201ENST00000363428 110 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 SNORD113-8-201ENST00000363497 74 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 SNORA67.1-201ENST00000364749 141 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 DEFA7P-201ENST00000382676 285 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 MTND3P2-201ENST00000438452 342 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 SNORA70.12-201ENST00000516084 153 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 MIR3169-201ENST00000578032 83 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 AC005786.1-201ENST00000588553 154 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 AL353149.1-201ENST00000610667 244 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 CTSLP2-204ENST00000629029 392 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 ZNF271P-202ENST00000465539 1970 ntBASIC2.96□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.47-201ENST00000362697 108 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 RNU4-90P-201ENST00000362773 141 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 RNU6-238P-201ENST00000363313 106 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.581-201ENST00000391017 97 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 AC060773.1-201ENST00000421698 310 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 AC010154.1-201ENST00000425857 269 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 IPO7P1-201ENST00000442031 636 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 SNORD65B-201ENST00000459126 73 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 MIR4446-201ENST00000578505 67 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 AC005828.6-201ENST00000606610 232 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.15-201ENST00000611544 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.16-201ENST00000613119 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.12-201ENST00000613778 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.20-201ENST00000613956 192 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.9-201ENST00000615427 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.11-201ENST00000616345 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.2-201ENST00000616535 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.3-201ENST00000617785 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.19-201ENST00000618602 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 RNU2-1-201ENST00000618664 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.6-201ENST00000619225 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.5-201ENST00000619465 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 U2.10-201ENST00000620268 191 ntBASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC144BQ3MJ40 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.64-201ENST00000362845 102 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.556-201ENST00000384677 113 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 RNU11-3P-201ENST00000391111 133 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 AC024067.1-201ENST00000426199 223 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 AL137847.3-201ENST00000611521 109 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC144BQ3MJ40 RNA5SP289-201ENST00000362332 137 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 snoU2-30.2-201ENST00000362805 70 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 MIR515-2-201ENST00000384883 83 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 MIR515-1-201ENST00000384884 83 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 SNORA3.2-201ENST00000408221 125 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 U3.40-201ENST00000408706 208 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 SNORA11.4-201ENST00000408823 129 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.602-201ENST00000410535 92 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 AC016909.1-201ENST00000415916 166 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 BX510359.4-201ENST00000423750 193 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 MTCYBP9-201ENST00000431021 303 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 MTND4LP30-201ENST00000454092 297 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 RNU6-496P-201ENST00000516145 99 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 RNA5SP320-201ENST00000516263 124 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 RNU7-193P-201ENST00000516723 65 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 SNORA31.25-201ENST00000517242 134 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 AL137100.2-201ENST00000555786 315 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 AC009127.3-201ENST00000570531 403 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 SDR42E1P4-201ENST00000620894 481 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 FO624990.1-201ENST00000636373 85 ntBASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC144BQ3MJ40 MIR6073-201ENST00000352083 89 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 SNORD81.1-201ENST00000363064 77 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 RNU6-324P-201ENST00000363957 106 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 SNORD115-30-201ENST00000364117 82 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 RNU4-30P-201ENST00000410245 143 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 RNU6-121P-201ENST00000410525 99 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms