Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 RNA5SP72-201ENST00000364442 117 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 Y_RNA.280-201ENST00000364765 112 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 MIR218-2-201ENST00000385006 110 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 RNU6-1328P-201ENST00000410938 106 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.89□□□□□ -1.79
NR1H3Q13133 AC025750.2-201ENST00000442609 450 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H3Q13133 SNORD105B-201ENST00000458770 79 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 OR9P1P-201ENST00000496431 281 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 AC104619.4-201ENST00000510773 249 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 Y_RNA.690-201ENST00000516603 95 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 RNU7-149P-201ENST00000516739 59 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H3Q13133 MIR4644-201ENST00000579929 84 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.89□□□□□ -1.79
NR1H3Q13133 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
NR1H3Q13133 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
NR1H3Q13133 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H3Q13133 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.88□□□□□ -1.79
NR1H3Q13133 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H3Q13133 SNORA40.5-201ENST00000391061 128 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 RNU1-101P-201ENST00000391171 127 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 FO393413.1-201ENST00000402892 195 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 AL161788.1-201ENST00000441805 169 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 MTCO1P44-201ENST00000441935 243 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 RPS29P31-201ENST00000446147 164 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.88□□□□□ -1.79
NR1H3Q13133 SNORA18.4-201ENST00000516440 124 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 RNU6-589P-201ENST00000516485 107 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.88□□□□□ -1.79
NR1H3Q13133 PRELID2P1-201ENST00000552837 301 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.88□□□□□ -1.79
NR1H3Q13133 AC107294.3-201ENST00000609211 526 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 RMST_8.1-201ENST00000610287 165 ntBASIC3.88□□□□□ -1.79
NR1H3Q13133 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H3Q13133 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NR1H3Q13133 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H3Q13133 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H3Q13133 PWAR6-201ENST00000552334 4618 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NR1H3Q13133 CD24P4-201ENST00000382840 243 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 SNORA22-201ENST00000383907 134 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 MIR562-201ENST00000384894 95 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 AL603914.1-201ENST00000401964 204 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 RPL23AP83-201ENST00000434984 473 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 CYP2C59P-201ENST00000457790 269 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 AC108081.1-201ENST00000604358 221 ntBASIC3.87□□□□□ -1.79
NR1H3Q13133 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NR1H3Q13133 RNU6-647P-201ENST00000364243 107 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 RNU6-1138P-201ENST00000365359 106 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 MIR1183-201ENST00000408856 89 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 Y_RNA.621-201ENST00000411065 96 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 AC123900.1-201ENST00000420390 96 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H3Q13133 CYCSP35-201ENST00000451978 304 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 RNU6-1096P-201ENST00000517089 102 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 MIR4738-201ENST00000579134 87 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 AL670379.3-201ENST00000605040 251 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 U6.73-201ENST00000619194 103 ntBASIC3.86□□□□□ -1.79
NR1H3Q13133 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
NR1H3Q13133 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H3Q13133 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H3Q13133 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H3Q13133 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H3Q13133 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 MIR520G-201ENST00000385064 90 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 AC006989.1-201ENST00000427212 131 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 RN7SL293P-201ENST00000481765 281 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 SEM1P1-201ENST00000506694 209 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 SNORD33.1-201ENST00000516213 88 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 RNU6-365P-201ENST00000517113 106 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 AC007179.3-201ENST00000604976 235 ntBASIC3.85□□□□□ -1.79
NR1H3Q13133 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H3Q13133 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NR1H3Q13133 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H3Q13133 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NR1H3Q13133 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H3Q13133 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H3Q13133 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H3Q13133 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
NR1H3Q13133 RNU6-755P-201ENST00000364400 103 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 MIR591-201ENST00000385290 95 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 RNA5SP424-201ENST00000390988 115 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 NDUFB1P1-201ENST00000435191 180 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 HMGN2P34-201ENST00000437647 269 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 AP001486.1-201ENST00000463339 476 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 AC093259.1-201ENST00000509755 300 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 RNU6-991P-201ENST00000516168 107 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 RNU6-1146P-201ENST00000516282 102 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 RNU6-856P-201ENST00000516959 98 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H3Q13133 SNORA62.6-201ENST00000606322 83 ntBASIC3.84□□□□□ -1.79
NR1H3Q13133 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H3Q13133 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H3Q13133 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms