Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 MTND3P23-201ENST00000431980 347 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 RPS27P1-201ENST00000450552 247 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC114982.1-201ENST00000469402 321 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC026782.1-201ENST00000512952 449 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.15□□□□□ -2.23
SMARCB1Q12824 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.15□□□□□ -2.23
SMARCB1Q12824 AC068137.4-201ENST00000638485 296 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 ZNF299P-201ENST00000406845 1804 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 RNU6-874P-201ENST00000362390 105 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 MIR548K-201ENST00000408406 116 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 MIR1185-2-201ENST00000408687 86 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 MIR1267-201ENST00000408723 78 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 RNU2-7P-201ENST00000410794 178 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 MTND4LP16-201ENST00000440828 295 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 SNORA31.10-201ENST00000516482 106 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AL590705.4-201ENST00000532209 134 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.14□□□□□ -2.23
SMARCB1Q12824 MIR4273-201ENST00000582824 84 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC068790.6-201ENST00000602558 258 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC018462.2-201ENST00000605375 395 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC005014.2-201ENST00000607795 599 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AC139792.2-201ENST00000624218 587 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 AL359697.1-201ENST00000624879 587 ntBASIC1.14□□□□□ -2.23
SMARCB1Q12824 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SMARCB1Q12824 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 RNU6-1013P-201ENST00000384180 107 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 SNORA12.1-201ENST00000390873 148 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR548F5-201ENST00000408421 86 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.13□□□□□ -2.23
SMARCB1Q12824 snoU13.27-201ENST00000459278 104 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 RPS26P55-201ENST00000471178 356 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AL163195.1-201ENST00000496941 348 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.13□□□□□ -2.23
SMARCB1Q12824 Y_RNA.670-201ENST00000516255 105 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AF235103.2-201ENST00000525753 346 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AC015688.6-201ENST00000577737 104 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR5701-3-201ENST00000578890 82 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR5695-201ENST00000579717 85 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR5701-1-201ENST00000585138 82 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AC060780.3-201ENST00000589464 80 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 AC125232.2-201ENST00000592457 143 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR5701-2-201ENST00000615634 82 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 MIR8063-201ENST00000621930 81 ntBASIC1.13□□□□□ -2.23
SMARCB1Q12824 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
SMARCB1Q12824 RNU6-137P-201ENST00000363680 108 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 Y_RNA.184-201ENST00000363884 108 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 Y_RNA.339-201ENST00000365325 102 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 RNU6-541P-201ENST00000384709 110 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 MIR320B2-201ENST00000408479 138 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 Y_RNA.594-201ENST00000410373 140 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 RPS3AP52-201ENST00000435639 297 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 MTND1P34-201ENST00000438556 671 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.12□□□□□ -2.23
SMARCB1Q12824 U8.22-201ENST00000459141 133 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 HMGN1P13-201ENST00000505795 138 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 AC093303.1-201ENST00000514549 295 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 RNU1-54P-201ENST00000517181 120 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 AC022217.4-201ENST00000604389 163 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 AL357075.2-201ENST00000614906 189 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SMARCB1Q12824 ICE2P2-201ENST00000483823 2787 ntBASIC1.12□□□□□ -2.23
SMARCB1Q12824 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMARCB1Q12824 Y_RNA.106-201ENST00000363189 100 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU6-1240P-201ENST00000365155 104 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU6-281P-201ENST00000384212 103 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU6-793P-201ENST00000384233 104 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU1-139P-201ENST00000391307 165 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SMARCB1Q12824 RPL21P1-201ENST00000399532 476 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 MTND3P8-201ENST00000412909 339 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.11□□□□□ -2.23
SMARCB1Q12824 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1321.4 ms