Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL139109.1-201ENST00000455491 297 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSRP1Q08945 RNU6-191P-201ENST00000516295 94 ntBASIC3.04□□□□□ -1.92
SSRP1Q08945 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
SSRP1Q08945 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.04□□□□□ -1.92
SSRP1Q08945 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
SSRP1Q08945 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSRP1Q08945 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SSRP1Q08945 Y_RNA.65-201ENST00000362846 100 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 RNU6-740P-201ENST00000364734 105 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 U8.9-201ENST00000365667 134 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 RNU2-52P-201ENST00000410680 190 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.03□□□□□ -1.92
SSRP1Q08945 AC008134.1-201ENST00000420943 193 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
SSRP1Q08945 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.03□□□□□ -1.92
SSRP1Q08945 PRELID3BP1-201ENST00000457142 540 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
SSRP1Q08945 AC096725.1-201ENST00000514266 313 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 SNORA70.12-201ENST00000516084 153 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 RNU4-71P-201ENST00000516258 113 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.03□□□□□ -1.92
SSRP1Q08945 AL162424.1-201ENST00000602325 221 ntBASIC3.03□□□□□ -1.92
SSRP1Q08945 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.03□□□□□ -1.92
SSRP1Q08945 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SSRP1Q08945 RNU6-859P-201ENST00000362728 107 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 RNU6-710P-201ENST00000410424 105 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.02□□□□□ -1.93
SSRP1Q08945 RNU7-26P-201ENST00000458980 63 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 SNORA4.4-201ENST00000515921 135 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 AC025647.1-201ENST00000517879 253 ntBASIC3.02□□□□□ -1.93
SSRP1Q08945 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SSRP1Q08945 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.02□□□□□ -1.93
SSRP1Q08945 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.01□□□□□ -1.93
SSRP1Q08945 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.01□□□□□ -1.93
SSRP1Q08945 RNA5SP282-201ENST00000516355 108 ntBASIC3.01□□□□□ -1.93
SSRP1Q08945 MIR4643-201ENST00000577473 78 ntBASIC3.01□□□□□ -1.93
SSRP1Q08945 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.01□□□□□ -1.93
SSRP1Q08945 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSRP1Q08945 SNORD114-7-201ENST00000362520 77 ntBASIC3□□□□□ -1.93
SSRP1Q08945 Y_RNA.99-201ENST00000363138 105 ntBASIC3□□□□□ -1.93
SSRP1Q08945 RNY1-201ENST00000364228 113 ntBASIC3□□□□□ -1.93
SSRP1Q08945 MIR873-201ENST00000401120 77 ntBASIC3□□□□□ -1.93
SSRP1Q08945 AL355796.1-201ENST00000406706 323 ntBASIC3□□□□□ -1.93
SSRP1Q08945 RNU2-61P-201ENST00000411069 191 ntBASIC3□□□□□ -1.93
SSRP1Q08945 SNORD65B-201ENST00000459126 73 ntBASIC3□□□□□ -1.93
SSRP1Q08945 RPS27AP9-201ENST00000477681 438 ntBASIC3□□□□□ -1.93
SSRP1Q08945 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3□□□□□ -1.93
SSRP1Q08945 AC010598.1-201ENST00000510378 103 ntBASIC3□□□□□ -1.93
SSRP1Q08945 RNU6-856P-201ENST00000516959 98 ntBASIC3□□□□□ -1.93
SSRP1Q08945 AC006023.1-201ENST00000603944 259 ntBASIC3□□□□□ -1.93
SSRP1Q08945 AC009779.6-201ENST00000603972 165 ntBASIC3□□□□□ -1.93
SSRP1Q08945 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSRP1Q08945 AL159152.1-201ENST00000635019 2587 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 MIR340-201ENST00000362125 95 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 Y_RNA.269-201ENST00000364685 89 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 RNU6-1240P-201ENST00000365155 104 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 SNORA20B-201ENST00000384220 132 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 RNU6-662P-201ENST00000384253 104 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 RNU6-1289P-201ENST00000384431 106 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 RNU6-907P-201ENST00000390924 102 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 AC016909.1-201ENST00000415916 166 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.99□□□□□ -1.93
SSRP1Q08945 AC063976.3-201ENST00000426849 329 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.99□□□□□ -1.93
SSRP1Q08945 RNA5SP356-201ENST00000515972 94 ntBASIC2.99□□□□□ -1.93
SSRP1Q08945 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSRP1Q08945 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSRP1Q08945 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSRP1Q08945 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.82-201ENST00000363000 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.92-201ENST00000363043 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.117-201ENST00000363294 101 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 RNU6-271P-201ENST00000363858 105 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.217-201ENST00000364214 105 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.235-201ENST00000364412 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.306-201ENST00000365015 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.312-201ENST00000365089 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.322-201ENST00000365151 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.590-201ENST00000410140 107 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 EDDM3CP-201ENST00000415977 425 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 AL121890.1-201ENST00000435457 205 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 RPL23AP7-203ENST00000449021 469 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.650-201ENST00000459002 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.641-201ENST00000459414 105 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.98□□□□□ -1.93
SSRP1Q08945 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.679-201ENST00000516416 91 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.777-201ENST00000516982 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 AC087441.2-201ENST00000529141 262 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
SSRP1Q08945 MIR4319-201ENST00000577285 85 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 MIR4672-201ENST00000583126 81 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.771-201ENST00000598668 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 RPL12P50-201ENST00000603116 116 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 Y_RNA.789-201ENST00000622480 102 ntBASIC2.98□□□□□ -1.93
SSRP1Q08945 AC006435.5-201ENST00000624486 112 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms