Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNORD31B-201ENST00000364977 69 ntBASIC1.81□□□□□ -2.12
IRX4P78413 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
IRX4P78413 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
IRX4P78413 AC114482.1-201ENST00000418010 247 ntBASIC1.81□□□□□ -2.12
IRX4P78413 EIF1P2-201ENST00000428233 350 ntBASIC1.81□□□□□ -2.12
IRX4P78413 AC096644.2-201ENST00000429278 159 ntBASIC1.81□□□□□ -2.12
IRX4P78413 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.81□□□□□ -2.12
IRX4P78413 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
IRX4P78413 RPL36AP21-201ENST00000490372 323 ntBASIC1.81□□□□□ -2.12
IRX4P78413 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
IRX4P78413 SNORD116.3-201ENST00000517176 78 ntBASIC1.81□□□□□ -2.12
IRX4P78413 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
IRX4P78413 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.81□□□□□ -2.12
IRX4P78413 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.81□□□□□ -2.12
IRX4P78413 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.81□□□□□ -2.12
IRX4P78413 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.81□□□□□ -2.12
IRX4P78413 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
IRX4P78413 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.5-201ENST00000362334 102 ntBASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.197-201ENST00000364004 102 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
IRX4P78413 SNORD42.2-201ENST00000365570 69 ntBASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.445-201ENST00000384168 102 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RNU6-793P-201ENST00000384233 104 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RNU6-160P-201ENST00000384591 107 ntBASIC1.8□□□□□ -2.12
IRX4P78413 MIR628-201ENST00000385229 95 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AL033519.2-201ENST00000403958 392 ntBASIC1.8□□□□□ -2.12
IRX4P78413 MIR1283-1-201ENST00000408494 87 ntBASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.592-201ENST00000410274 109 ntBASIC1.8□□□□□ -2.12
IRX4P78413 Y_RNA.605-201ENST00000410577 105 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AC016925.1-201ENST00000458303 298 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.8□□□□□ -2.12
IRX4P78413 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RNVU1-2-201ENST00000516326 135 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RNU6-344P-201ENST00000516635 111 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AC144568.1-201ENST00000520139 137 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AC087441.2-201ENST00000529141 262 ntBASIC1.8□□□□□ -2.12
IRX4P78413 RRN3P3-201ENST00000549207 578 ntBASIC1.8□□□□□ -2.12
IRX4P78413 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.8□□□□□ -2.12
IRX4P78413 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
IRX4P78413 MIR4753-201ENST00000585119 83 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AC010999.1-201ENST00000611856 324 ntBASIC1.8□□□□□ -2.12
IRX4P78413 U1.36-201ENST00000620684 176 ntBASIC1.8□□□□□ -2.12
IRX4P78413 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
IRX4P78413 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.179-201ENST00000363844 90 ntBASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.796-201ENST00000364268 102 ntBASIC1.79□□□□□ -2.12
IRX4P78413 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.252-201ENST00000364556 101 ntBASIC1.79□□□□□ -2.12
IRX4P78413 SNORD87-201ENST00000364849 89 ntBASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.799-201ENST00000364992 102 ntBASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.415-201ENST00000384012 112 ntBASIC1.79□□□□□ -2.12
IRX4P78413 RNU6-281P-201ENST00000384212 103 ntBASIC1.79□□□□□ -2.12
IRX4P78413 RNU6-308P-201ENST00000390957 107 ntBASIC1.79□□□□□ -2.12
IRX4P78413 MIR300-201ENST00000401138 83 ntBASIC1.79□□□□□ -2.12
IRX4P78413 RNA5SP504-201ENST00000410676 117 ntBASIC1.79□□□□□ -2.12
IRX4P78413 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
IRX4P78413 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.79□□□□□ -2.12
IRX4P78413 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.79□□□□□ -2.12
IRX4P78413 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.79□□□□□ -2.12
IRX4P78413 UBE2V1P7-201ENST00000446395 340 ntBASIC1.79□□□□□ -2.12
IRX4P78413 CHEK2P4-201ENST00000450340 246 ntBASIC1.79□□□□□ -2.12
IRX4P78413 Y_RNA.639-201ENST00000458981 102 ntBASIC1.79□□□□□ -2.12
IRX4P78413 HMGN2P9-201ENST00000476875 229 ntBASIC1.79□□□□□ -2.12
IRX4P78413 MZT1P2-201ENST00000604387 248 ntBASIC1.79□□□□□ -2.12
IRX4P78413 uc_338.22-201ENST00000622722 187 ntBASIC1.79□□□□□ -2.12
IRX4P78413 AC008873.1-201ENST00000625051 138 ntBASIC1.79□□□□□ -2.12
IRX4P78413 LINC02555-201ENST00000563933 1951 ntBASIC1.79□□□□□ -2.12
IRX4P78413 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
IRX4P78413 RNU1-62P-201ENST00000362599 164 ntBASIC1.78□□□□□ -2.12
IRX4P78413 Y_RNA.116-201ENST00000363292 103 ntBASIC1.78□□□□□ -2.12
IRX4P78413 Y_RNA.138-201ENST00000363462 102 ntBASIC1.78□□□□□ -2.12
IRX4P78413 MIR489-201ENST00000384923 84 ntBASIC1.78□□□□□ -2.12
IRX4P78413 MIR518E-201ENST00000385252 88 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AC139712.2-201ENST00000424302 339 ntBASIC1.78□□□□□ -2.12
IRX4P78413 MTCO2P12-201ENST00000427426 682 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AC010531.2-201ENST00000465012 153 ntBASIC1.78□□□□□ -2.12
IRX4P78413 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
IRX4P78413 Y_RNA.683-201ENST00000516508 93 ntBASIC1.78□□□□□ -2.12
IRX4P78413 DNAJC19P9-201ENST00000555084 351 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.78□□□□□ -2.12
IRX4P78413 AC092447.9-201ENST00000603395 144 ntBASIC1.78□□□□□ -2.12
IRX4P78413 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
IRX4P78413 U2.1-201ENST00000618978 145 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AC091925.1-201ENST00000623204 462 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AL078596.1-201ENST00000624856 447 ntBASIC1.78□□□□□ -2.12
IRX4P78413 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.78□□□□□ -2.12
IRX4P78413 MIR4272-201ENST00000635924 64 ntBASIC1.78□□□□□ -2.12
IRX4P78413 AC068205.3-201ENST00000636385 468 ntBASIC1.78□□□□□ -2.12
IRX4P78413 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
IRX4P78413 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
IRX4P78413 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
IRX4P78413 MIR340-201ENST00000362125 95 ntBASIC1.77□□□□□ -2.13
IRX4P78413 Y_RNA.11-201ENST00000362375 109 ntBASIC1.77□□□□□ -2.13
IRX4P78413 RNU6-1301P-201ENST00000362724 104 ntBASIC1.77□□□□□ -2.13
IRX4P78413 Y_RNA.122-201ENST00000363331 96 ntBASIC1.77□□□□□ -2.13
IRX4P78413 Y_RNA.132-201ENST00000363421 102 ntBASIC1.77□□□□□ -2.13
IRX4P78413 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
IRX4P78413 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms