Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AL139247.1-201ENST00000422768 325 ntBASIC4.05□□□□□ -1.76
USP46P62068 SNRPGP13-201ENST00000442212 177 ntBASIC4.05□□□□□ -1.76
USP46P62068 U3.44-201ENST00000458938 192 ntBASIC4.05□□□□□ -1.76
USP46P62068 AP001486.1-201ENST00000463339 476 ntBASIC4.05□□□□□ -1.76
USP46P62068 RNU6-991P-201ENST00000516168 107 ntBASIC4.05□□□□□ -1.76
USP46P62068 RNU6-1231P-201ENST00000517185 103 ntBASIC4.05□□□□□ -1.76
USP46P62068 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
USP46P62068 AC008507.4-201ENST00000585464 127 ntBASIC4.05□□□□□ -1.76
USP46P62068 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.05□□□□□ -1.76
USP46P62068 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP46P62068 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.05□□□□□ -1.76
USP46P62068 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
USP46P62068 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP46P62068 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP46P62068 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP46P62068 Y_RNA.267-201ENST00000364679 109 ntBASIC4.04□□□□□ -1.76
USP46P62068 SNORA73.2-201ENST00000364946 201 ntBASIC4.04□□□□□ -1.76
USP46P62068 Y_RNA.388-201ENST00000383919 113 ntBASIC4.04□□□□□ -1.76
USP46P62068 MIR181B1-201ENST00000385240 110 ntBASIC4.04□□□□□ -1.76
USP46P62068 MIR199A2-201ENST00000385289 110 ntBASIC4.04□□□□□ -1.76
USP46P62068 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
USP46P62068 SNORA57.3-201ENST00000411095 141 ntBASIC4.04□□□□□ -1.76
USP46P62068 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP46P62068 AL161788.1-201ENST00000441805 169 ntBASIC4.04□□□□□ -1.76
USP46P62068 AL133547.1-201ENST00000448546 220 ntBASIC4.04□□□□□ -1.76
USP46P62068 SCARNA15-202ENST00000516881 127 ntBASIC4.04□□□□□ -1.76
USP46P62068 RNU6-762P-201ENST00000517107 102 ntBASIC4.04□□□□□ -1.76
USP46P62068 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.04□□□□□ -1.76
USP46P62068 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.04□□□□□ -1.76
USP46P62068 MIR4444-1-201ENST00000581696 74 ntBASIC4.04□□□□□ -1.76
USP46P62068 MIR4444-2-201ENST00000584390 74 ntBASIC4.04□□□□□ -1.76
USP46P62068 AL591424.2-201ENST00000617023 128 ntBASIC4.04□□□□□ -1.76
USP46P62068 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USP46P62068 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
USP46P62068 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
USP46P62068 OTUD4P1-201ENST00000237841 3067 ntBASIC4.04□□□□□ -1.76
USP46P62068 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.04□□□□□ -1.76
USP46P62068 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
USP46P62068 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.03□□□□□ -1.76
USP46P62068 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP46P62068 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
USP46P62068 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP46P62068 MIR802-201ENST00000390235 94 ntBASIC4.03□□□□□ -1.76
USP46P62068 RNU6-440P-201ENST00000390882 105 ntBASIC4.03□□□□□ -1.76
USP46P62068 AC123900.1-201ENST00000420390 96 ntBASIC4.03□□□□□ -1.76
USP46P62068 AC060773.1-201ENST00000421698 310 ntBASIC4.03□□□□□ -1.76
USP46P62068 RNU7-170P-201ENST00000459303 61 ntBASIC4.03□□□□□ -1.76
USP46P62068 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.03□□□□□ -1.76
USP46P62068 CKS1BP2-201ENST00000497342 240 ntBASIC4.03□□□□□ -1.76
USP46P62068 SCGB1D5P-201ENST00000515134 247 ntBASIC4.03□□□□□ -1.76
USP46P62068 RNU6-856P-201ENST00000516959 98 ntBASIC4.03□□□□□ -1.76
USP46P62068 RNU6-711P-201ENST00000517255 106 ntBASIC4.03□□□□□ -1.76
USP46P62068 MIR92B-201ENST00000607575 96 ntBASIC4.03□□□□□ -1.76
USP46P62068 AC110079.1-202ENST00000635213 138 ntBASIC4.03□□□□□ -1.76
USP46P62068 MAPK10-372ENST00000641954 3413 ntBASIC4.03□□□□□ -1.76
USP46P62068 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
USP46P62068 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP46P62068 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP46P62068 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP46P62068 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.02□□□□□ -1.77
USP46P62068 MIR126-201ENST00000362291 85 ntBASIC4.02□□□□□ -1.77
USP46P62068 MIR548A2-201ENST00000384956 97 ntBASIC4.02□□□□□ -1.77
USP46P62068 MIR670-201ENST00000390142 98 ntBASIC4.02□□□□□ -1.77
USP46P62068 RNA5SP171-201ENST00000391071 115 ntBASIC4.02□□□□□ -1.77
USP46P62068 AC017083.1-201ENST00000428093 483 ntBASIC4.02□□□□□ -1.77
USP46P62068 RN7SKP43-201ENST00000516173 320 ntBASIC4.02□□□□□ -1.77
USP46P62068 RNU6-1146P-201ENST00000516282 102 ntBASIC4.02□□□□□ -1.77
USP46P62068 RN7SKP282-201ENST00000516824 299 ntBASIC4.02□□□□□ -1.77
USP46P62068 MIR3199-1-201ENST00000582434 88 ntBASIC4.02□□□□□ -1.77
USP46P62068 AC007229.1-201ENST00000590455 412 ntBASIC4.02□□□□□ -1.77
USP46P62068 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
USP46P62068 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP46P62068 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP46P62068 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP46P62068 RNA5SP295-201ENST00000362655 121 ntBASIC4.01□□□□□ -1.77
USP46P62068 RNU6-414P-201ENST00000363705 104 ntBASIC4.01□□□□□ -1.77
USP46P62068 Y_RNA.323-201ENST00000365157 109 ntBASIC4.01□□□□□ -1.77
USP46P62068 Y_RNA.544-201ENST00000384650 113 ntBASIC4.01□□□□□ -1.77
USP46P62068 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP46P62068 AC009969.1-201ENST00000438726 172 ntBASIC4.01□□□□□ -1.77
USP46P62068 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
USP46P62068 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.01□□□□□ -1.77
USP46P62068 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
USP46P62068 Y_RNA.198-201ENST00000364013 98 ntBASIC4□□□□□ -1.77
USP46P62068 RNU1-96P-201ENST00000364163 162 ntBASIC4□□□□□ -1.77
USP46P62068 Y_RNA.213-201ENST00000364178 111 ntBASIC4□□□□□ -1.77
USP46P62068 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
USP46P62068 Y_RNA.362-201ENST00000365518 110 ntBASIC4□□□□□ -1.77
USP46P62068 MIR518F-201ENST00000384973 87 ntBASIC4□□□□□ -1.77
USP46P62068 MIR759-201ENST00000390224 91 ntBASIC4□□□□□ -1.77
USP46P62068 RNU11-5P-201ENST00000391216 129 ntBASIC4□□□□□ -1.77
USP46P62068 AL159169.1-201ENST00000421119 127 ntBASIC4□□□□□ -1.77
USP46P62068 RNU7-99P-201ENST00000516271 62 ntBASIC4□□□□□ -1.77
USP46P62068 RNU1-95P-201ENST00000516357 160 ntBASIC4□□□□□ -1.77
USP46P62068 RNY4P20-201ENST00000516678 93 ntBASIC4□□□□□ -1.77
USP46P62068 RNU1-128P-201ENST00000516704 160 ntBASIC4□□□□□ -1.77
USP46P62068 Y_RNA.714-201ENST00000517065 90 ntBASIC4□□□□□ -1.77
USP46P62068 SCARNA11.3-201ENST00000517276 130 ntBASIC4□□□□□ -1.77
USP46P62068 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4□□□□□ -1.77
USP46P62068 RNU6-94P-201ENST00000607728 107 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms